| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871991
Identifier: 116871991
GI number: 116871991
Start: 609912
End: 611009
Strand: Direct
Name: 116871991
Synonym: lwe0571
Alternate gene names: NA
Gene position: 609912-611009 (Clockwise)
Preceding gene: 116871990
Following gene: 116871992
Centisome position: 21.67
GC content: 33.88
Gene sequence:
>1098_bases ATGCGTAAACGTCATTTAAGTAGTAAATTATTTTTCGCCGGATTAGTGTTATTTATTATTGGGGCTATTGGTGTGGCACT GACGATGAAATCAGGCGACATGATTGAAAAAGGCGAATCACTTACAAAAGAGTGGGATTTAGCAAACGGTGATATTAGTA AAATTGCTTTCTCTTCAAACCACGATACATTAGTTGAGTGGAAAGAAAGTACGAATGGTAAAAATTACGTGGAACTAAAA GGTAATTATTCAAAAGACGATAAAAAAGCAATCGAAAAATTAAAACCAGTTTCAGACAATGGGAAAACTATAGATATTAA TGTACCAGAAGAAAACAATTGGTTTAACTTTGGGAAGATATATGCCTATGGTCAACAGAAGTTAACAGTTTATTTAACAA AAGACTCAAAGCTAAATGCTTTACAAGTTAAAACAAATTCTGGGGATTTAAATATCTCGAATTTTAAAGTAGAAAAACTT GTTACTTCATCAAGCTCTGGTGAGTTAAAAGTTAATCGAATAGTAGCTGATACTGCGAAAATTTCTACATCCTCCGGGGA TATCGACCTTTCGAACACAAAAGCGAATACAGTACTTGAAACCAATTCCGGAGAAACCAATATTACAAAATTAACTGGTG ATTTAGAGTTGGATGGTAGCTCAGGTGATGTAACTGCTAATGGTATAAAAGCGAAAAATCTTAAAATCGCGATAAGTTCT GGTGAAATAGAGTTTACAAACGGTGCGGTAACTGAATTAGCGATATTAACTACAAGTTCAGGCGATATTTCTGCCCATTC AAAAGGGGAACTGCATGTCGAATCTAATTCGGGATCCATTGAGGTAGAAGGTGTAACAAATAACTTAACAGCGAATACTA GCTCAGGTGATATTGAAGCATCCGTTGTTGAAACGGTTAAAAAAATTCAAATGAATACTAATTCAGGAGAAATCGATTTA AAACTACCTACTGATTTTAAAGCAATCTATGAAACGAAAAGTAATTCTGGTAGTATCAAAGTTCCTACAAGCGATACAAA CACAGAAAATCGTGTAACAGTAAAATCAAGCTCAGGTGATATTACAATTGAAAAATAA
Upstream 100 bases:
>100_bases ATGCTTTTATTTGTAGTAAATATTCTATCTAGTTTTACAATCAAAACGACAATGGCAATTATCCAGTGGCATAAATATGC AGTAAAAGGGGGCGGAAAAA
Downstream 100 bases:
>100_bases AGAATTCTATGCGCTAATTATTTAATTAGCGCATTTTTTTGTAAAAAAGGGGTAAAGTCTGATAAACTGCTTCATCAATA TATGTAAGTGGAAGGAGAAT
Product: putative secreted protein
Products: NA
Alternate protein names: Cell Surface Protein
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MRKRHLSSKLFFAGLVLFIIGAIGVALTMKSGDMIEKGESLTKEWDLANGDISKIAFSSNHDTLVEWKESTNGKNYVELK GNYSKDDKKAIEKLKPVSDNGKTIDINVPEENNWFNFGKIYAYGQQKLTVYLTKDSKLNALQVKTNSGDLNISNFKVEKL VTSSSSGELKVNRIVADTAKISTSSGDIDLSNTKANTVLETNSGETNITKLTGDLELDGSSGDVTANGIKAKNLKIAISS GEIEFTNGAVTELAILTTSSGDISAHSKGELHVESNSGSIEVEGVTNNLTANTSSGDIEASVVETVKKIQMNTNSGEIDL KLPTDFKAIYETKSNSGSIKVPTSDTNTENRVTVKSSSGDITIEK
Sequences:
>Translated_365_residues MRKRHLSSKLFFAGLVLFIIGAIGVALTMKSGDMIEKGESLTKEWDLANGDISKIAFSSNHDTLVEWKESTNGKNYVELK GNYSKDDKKAIEKLKPVSDNGKTIDINVPEENNWFNFGKIYAYGQQKLTVYLTKDSKLNALQVKTNSGDLNISNFKVEKL VTSSSSGELKVNRIVADTAKISTSSGDIDLSNTKANTVLETNSGETNITKLTGDLELDGSSGDVTANGIKAKNLKIAISS GEIEFTNGAVTELAILTTSSGDISAHSKGELHVESNSGSIEVEGVTNNLTANTSSGDIEASVVETVKKIQMNTNSGEIDL KLPTDFKAIYETKSNSGSIKVPTSDTNTENRVTVKSSSGDITIEK >Mature_365_residues MRKRHLSSKLFFAGLVLFIIGAIGVALTMKSGDMIEKGESLTKEWDLANGDISKIAFSSNHDTLVEWKESTNGKNYVELK GNYSKDDKKAIEKLKPVSDNGKTIDINVPEENNWFNFGKIYAYGQQKLTVYLTKDSKLNALQVKTNSGDLNISNFKVEKL VTSSSSGELKVNRIVADTAKISTSSGDIDLSNTKANTVLETNSGETNITKLTGDLELDGSSGDVTANGIKAKNLKIAISS GEIEFTNGAVTELAILTTSSGDISAHSKGELHVESNSGSIEVEGVTNNLTANTSSGDIEASVVETVKKIQMNTNSGEIDL KLPTDFKAIYETKSNSGSIKVPTSDTNTENRVTVKSSSGDITIEK
Specific function: Unknown
COG id: COG3595
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39193; Mature: 39193
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRHLSSKLFFAGLVLFIIGAIGVALTMKSGDMIEKGESLTKEWDLANGDISKIAFSSN CCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHCCCCCCHHCCCCCCCEEEEEECCC HDTLVEWKESTNGKNYVELKGNYSKDDKKAIEKLKPVSDNGKTIDINVPEENNWFNFGKI CCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCEECEEE YAYGQQKLTVYLTKDSKLNALQVKTNSGDLNISNFKVEKLVTSSSSGELKVNRIVADTAK EEECCEEEEEEEECCCCCEEEEEEECCCCEEECEEEEEEEEECCCCCCEEEEEEEEECEE ISTSSGDIDLSNTKANTVLETNSGETNITKLTGDLELDGSSGDVTANGIKAKNLKIAISS EECCCCCEEECCCCCCEEEECCCCCCEEEEEEEEEEECCCCCCEEECCEEECEEEEEEEC GEIEFTNGAVTELAILTTSSGDISAHSKGELHVESNSGSIEVEGVTNNLTANTSSGDIEA CEEEECCCCEEEEEEEEECCCCEECCCCCEEEEECCCCEEEEEEECCCEEECCCCCCEEH SVVETVKKIQMNTNSGEIDLKLPTDFKAIYETKSNSGSIKVPTSDTNTENRVTVKSSSGD HHHHHHHHEEECCCCCEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEECCCCC ITIEK EEEEC >Mature Secondary Structure MRKRHLSSKLFFAGLVLFIIGAIGVALTMKSGDMIEKGESLTKEWDLANGDISKIAFSSN CCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHCCCCCCHHCCCCCCCEEEEEECCC HDTLVEWKESTNGKNYVELKGNYSKDDKKAIEKLKPVSDNGKTIDINVPEENNWFNFGKI CCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCEECEEE YAYGQQKLTVYLTKDSKLNALQVKTNSGDLNISNFKVEKLVTSSSSGELKVNRIVADTAK EEECCEEEEEEEECCCCCEEEEEEECCCCEEECEEEEEEEEECCCCCCEEEEEEEEECEE ISTSSGDIDLSNTKANTVLETNSGETNITKLTGDLELDGSSGDVTANGIKAKNLKIAISS EECCCCCEEECCCCCCEEEECCCCCCEEEEEEEEEEECCCCCCEEECCEEECEEEEEEEC GEIEFTNGAVTELAILTTSSGDISAHSKGELHVESNSGSIEVEGVTNNLTANTSSGDIEA CEEEECCCCEEEEEEEEECCCCEECCCCCEEEEECCCCEEEEEEECCCEEECCCCCCEEH SVVETVKKIQMNTNSGEIDLKLPTDFKAIYETKSNSGSIKVPTSDTNTENRVTVKSSSGD HHHHHHHHEEECCCCCEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEECCCCC ITIEK EEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA