| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871990
Identifier: 116871990
GI number: 116871990
Start: 609329
End: 609919
Strand: Direct
Name: 116871990
Synonym: lwe0570
Alternate gene names: NA
Gene position: 609329-609919 (Clockwise)
Preceding gene: 116871989
Following gene: 116871991
Centisome position: 21.65
GC content: 34.18
Gene sequence:
>591_bases ATGAATAAACAAGATTTTCTAAATGAATTAAATCAGCGACTAGAATTGCTTGATCCAAAAGAACGAAGAGAACTATTGTC TGACTATCAAGAGCATTTTAGAAACGGTATTGAAGCGGGGAAAAGTGAAGAGCAAATCGTATTTGACCTAGGTAAGCCAG AAGAAATTGCCGCAGATATTTTAAGTGAACGCGACATTCGTGAAGAACATGTTGAAACAGATTATTATTATGTTCCAAGG AAAAACCAAAATGAAAATAGATCAATGAGTAAACAAATTTTAATTGGAGTAGGCTTATTTTTCTTAGATATTTGCCTTAT TATCCCAATTATGGTCTCCTTGTGGGCTCTAGTTATTTCACTATGGACAACAGTTGGAGCATTCATTCTTTCACCAATTT TGCTTGGTGTTGGACTTTTATTTGGAGAAGAAATCGAAGTGTATCAAATGTTTATGTCCATTGGGCTTGTTGGACTAGGA TTGATGCTTTTATTTGTAGTAAATATTCTATCTAGTTTTACAATCAAAACGACAATGGCAATTATCCAGTGGCATAAATA TGCAGTAAAAGGGGGCGGAAAAAATGCGTAA
Upstream 100 bases:
>100_bases CTGACGGTAAAAGGGGAAATTTACTTGAATGAGCTAATCTCTGAATGGAATAATTTTACAGATAGTGTTGCAAAGCTTTT AACGGAAGGGGAAGCAGTAA
Downstream 100 bases:
>100_bases ACGTCATTTAAGTAGTAAATTATTTTTCGCCGGATTAGTGTTATTTATTATTGGGGCTATTGGTGTGGCACTGACGATGA AATCAGGCGACATGATTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MNKQDFLNELNQRLELLDPKERRELLSDYQEHFRNGIEAGKSEEQIVFDLGKPEEIAADILSERDIREEHVETDYYYVPR KNQNENRSMSKQILIGVGLFFLDICLIIPIMVSLWALVISLWTTVGAFILSPILLGVGLLFGEEIEVYQMFMSIGLVGLG LMLLFVVNILSSFTIKTTMAIIQWHKYAVKGGGKNA
Sequences:
>Translated_196_residues MNKQDFLNELNQRLELLDPKERRELLSDYQEHFRNGIEAGKSEEQIVFDLGKPEEIAADILSERDIREEHVETDYYYVPR KNQNENRSMSKQILIGVGLFFLDICLIIPIMVSLWALVISLWTTVGAFILSPILLGVGLLFGEEIEVYQMFMSIGLVGLG LMLLFVVNILSSFTIKTTMAIIQWHKYAVKGGGKNA >Mature_196_residues MNKQDFLNELNQRLELLDPKERRELLSDYQEHFRNGIEAGKSEEQIVFDLGKPEEIAADILSERDIREEHVETDYYYVPR KNQNENRSMSKQILIGVGLFFLDICLIIPIMVSLWALVISLWTTVGAFILSPILLGVGLLFGEEIEVYQMFMSIGLVGLG LMLLFVVNILSSFTIKTTMAIIQWHKYAVKGGGKNA
Specific function: Unknown
COG id: COG4709
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22370; Mature: 22370
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQDFLNELNQRLELLDPKERRELLSDYQEHFRNGIEAGKSEEQIVFDLGKPEEIAADI CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHH LSERDIREEHVETDYYYVPRKNQNENRSMSKQILIGVGLFFLDICLIIPIMVSLWALVIS HHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWTTVGAFILSPILLGVGLLFGEEIEVYQMFMSIGLVGLGLMLLFVVNILSSFTIKTTMA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIQWHKYAVKGGGKNA HHHHHHHHHCCCCCCC >Mature Secondary Structure MNKQDFLNELNQRLELLDPKERRELLSDYQEHFRNGIEAGKSEEQIVFDLGKPEEIAADI CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHH LSERDIREEHVETDYYYVPRKNQNENRSMSKQILIGVGLFFLDICLIIPIMVSLWALVIS HHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWTTVGAFILSPILLGVGLLFGEEIEVYQMFMSIGLVGLGLMLLFVVNILSSFTIKTTMA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIQWHKYAVKGGGKNA HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA