Click here to switch to the map view.

The map label for this gene is pbpX [H]

Identifier: 116871921

GI number: 116871921

Start: 541438

End: 542604

Strand: Direct

Name: pbpX [H]

Synonym: lwe0501

Alternate gene names: 116871921

Gene position: 541438-542604 (Clockwise)

Preceding gene: 116871919

Following gene: 116871939

Centisome position: 19.24

GC content: 32.73

Gene sequence:

>1167_bases
ATGAATCGACGCGAAAGACAAAAACACAAAAGACGTAAGAAACTAATTATCGTGTTGAGTACTTTACTTGTACTATTTAT
TACCACAAGTTGGATAATAGTCGAGTTCAAAAGTAAAGCAGAAGATACAGAGGCCGCACCAGAAGAACAAACACCTAAAG
AAAGTACTACTGAAAAACCAACAAAACCACAGACGACTAATGAAAAGCCAACTCAAGCAATCATTAATAATTATGAAATC
GATAATTATTTAAAGAAAATTGGTTTTAGTGGGTCCGTGCTAATTGTTCGTGAAGGAAAAACCATTTTACAAAAAGGCTA
TTTATATGCGAATCGTGAAACAAAAGCCCTAAATACGCCAGACACACTTTACTACATTGGTTCTTCTCAAAAAGCGATAA
TAGCAACTGCCATCTTACAATTAGAAGAAAAAGGTAAAATAAGTACAGAAGATCCAATTTCAAAATACTTACCTAATTTT
CCTAATGGCAATCAAATTTTACTAAAAAACTTTTTAAATCATACTTCTGGAATTGTAGGTAAACCAAAAGTTTCTGGGAC
AGTTTCGCCAAAAGAATTAATTGAAGCTATTGAAAGTCAGGGGATTAAAAGATCACAGCCTGGGAAATGGAACTATTTAG
ATGCCAATTATATGGTTTTAGCTTATCTTGTTGAAATGATTAGTGGGGAATCTTTGTCTAACTATTTGCAAAAAAATATT
TTTGAACCAGCACAAATGACGCATACTGGAACGTATCAAAAAGATATTGAAAATGGTACAAATGAATCCAAAGGCTATTT
GATAAAGAAAGATGGTACATACAAAAATCCTAAATTAGCTGACTTATCTCAATTATATGGAGCAGGAGATATAAGTATGA
CTACCAAGGATATGTACTTATTCGATAAAGCGCTGATGGATAAAAAATTGATTTCAGAAGCTAGCTTAAAGAAAATGTTT
ACGCCAGGAAGTACATCTGGTTATGGCATGGGTTTTTATGTAGATCCTGGAAGTTATAATAGCCACGGGGTTCTAAGTGG
TTGGAACGTGTCTAACAGCATGAGCCATACCGGTAAAACGTACGTTATTTTATTTTCTAATATCCAAAATAATATTCATT
CCTTTGGGAAAGTAAATAATCATATTTACAAATTACTCAATAAGTAA

Upstream 100 bases:

>100_bases
TGTGGAGTGTTAGACATCAAGCGGAATTCGGGATAATTCAGCTGATGTATTCTCTTTTGGGAAGGTCATTTACTAATTAG
ACTAAACCAGGAGTGATGAA

Downstream 100 bases:

>100_bases
AAATATGAAATACGGCAAACAAAGCCAATAGCAACGTTAGGCTATCCTAACGTTGCTATTGGCTTTGTTTTTTCGATATT
CACTTCTATGTCATTTTTTC

Product: secreted penicillin-binding protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MNRRERQKHKRRKKLIIVLSTLLVLFITTSWIIVEFKSKAEDTEAAPEEQTPKESTTEKPTKPQTTNEKPTQAIINNYEI
DNYLKKIGFSGSVLIVREGKTILQKGYLYANRETKALNTPDTLYYIGSSQKAIIATAILQLEEKGKISTEDPISKYLPNF
PNGNQILLKNFLNHTSGIVGKPKVSGTVSPKELIEAIESQGIKRSQPGKWNYLDANYMVLAYLVEMISGESLSNYLQKNI
FEPAQMTHTGTYQKDIENGTNESKGYLIKKDGTYKNPKLADLSQLYGAGDISMTTKDMYLFDKALMDKKLISEASLKKMF
TPGSTSGYGMGFYVDPGSYNSHGVLSGWNVSNSMSHTGKTYVILFSNIQNNIHSFGKVNNHIYKLLNK

Sequences:

>Translated_388_residues
MNRRERQKHKRRKKLIIVLSTLLVLFITTSWIIVEFKSKAEDTEAAPEEQTPKESTTEKPTKPQTTNEKPTQAIINNYEI
DNYLKKIGFSGSVLIVREGKTILQKGYLYANRETKALNTPDTLYYIGSSQKAIIATAILQLEEKGKISTEDPISKYLPNF
PNGNQILLKNFLNHTSGIVGKPKVSGTVSPKELIEAIESQGIKRSQPGKWNYLDANYMVLAYLVEMISGESLSNYLQKNI
FEPAQMTHTGTYQKDIENGTNESKGYLIKKDGTYKNPKLADLSQLYGAGDISMTTKDMYLFDKALMDKKLISEASLKKMF
TPGSTSGYGMGFYVDPGSYNSHGVLSGWNVSNSMSHTGKTYVILFSNIQNNIHSFGKVNNHIYKLLNK
>Mature_388_residues
MNRRERQKHKRRKKLIIVLSTLLVLFITTSWIIVEFKSKAEDTEAAPEEQTPKESTTEKPTKPQTTNEKPTQAIINNYEI
DNYLKKIGFSGSVLIVREGKTILQKGYLYANRETKALNTPDTLYYIGSSQKAIIATAILQLEEKGKISTEDPISKYLPNF
PNGNQILLKNFLNHTSGIVGKPKVSGTVSPKELIEAIESQGIKRSQPGKWNYLDANYMVLAYLVEMISGESLSNYLQKNI
FEPAQMTHTGTYQKDIENGTNESKGYLIKKDGTYKNPKLADLSQLYGAGDISMTTKDMYLFDKALMDKKLISEASLKKMF
TPGSTSGYGMGFYVDPGSYNSHGVLSGWNVSNSMSHTGKTYVILFSNIQNNIHSFGKVNNHIYKLLNK

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential). Note=Localizes to the division septum during vegetative growth, and accumulates at the prespore during sporulation [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-lactamase family [H]

Homologues:

Organism=Escherichia coli, GI87082101, Length=220, Percent_Identity=28.1818181818182, Blast_Score=75, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17550934, Length=341, Percent_Identity=21.1143695014663, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 43574; Mature: 43574

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRERQKHKRRKKLIIVLSTLLVLFITTSWIIVEFKSKAEDTEAAPEEQTPKESTTEKP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
TKPQTTNEKPTQAIINNYEIDNYLKKIGFSGSVLIVREGKTILQKGYLYANRETKALNTP
CCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEEECCHHHHHCCCEEECCCCCCCCCC
DTLYYIGSSQKAIIATAILQLEEKGKISTEDPISKYLPNFPNGNQILLKNFLNHTSGIVG
CEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCC
KPKVSGTVSPKELIEAIESQGIKRSQPGKWNYLDANYMVLAYLVEMISGESLSNYLQKNI
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHCCHHHHHHHHHHC
FEPAQMTHTGTYQKDIENGTNESKGYLIKKDGTYKNPKLADLSQLYGAGDISMTTKDMYL
CCCHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEEHHHHHH
FDKALMDKKLISEASLKKMFTPGSTSGYGMGFYVDPGSYNSHGVLSGWNVSNSMSHTGKT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCCE
YVILFSNIQNNIHSFGKVNNHIYKLLNK
EEEEEHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRRERQKHKRRKKLIIVLSTLLVLFITTSWIIVEFKSKAEDTEAAPEEQTPKESTTEKP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
TKPQTTNEKPTQAIINNYEIDNYLKKIGFSGSVLIVREGKTILQKGYLYANRETKALNTP
CCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEEECCHHHHHCCCEEECCCCCCCCCC
DTLYYIGSSQKAIIATAILQLEEKGKISTEDPISKYLPNFPNGNQILLKNFLNHTSGIVG
CEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCC
KPKVSGTVSPKELIEAIESQGIKRSQPGKWNYLDANYMVLAYLVEMISGESLSNYLQKNI
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHCCHHHHHHHHHHC
FEPAQMTHTGTYQKDIENGTNESKGYLIKKDGTYKNPKLADLSQLYGAGDISMTTKDMYL
CCCHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEEHHHHHH
FDKALMDKKLISEASLKKMFTPGSTSGYGMGFYVDPGSYNSHGVLSGWNVSNSMSHTGKT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCCE
YVILFSNIQNNIHSFGKVNNHIYKLLNK
EEEEEHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]