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The map label for this gene is 116871900

Identifier: 116871900

GI number: 116871900

Start: 516118

End: 517047

Strand: Direct

Name: 116871900

Synonym: lwe0480

Alternate gene names: NA

Gene position: 516118-517047 (Clockwise)

Preceding gene: 116871899

Following gene: 116871903

Centisome position: 18.34

GC content: 31.4

Gene sequence:

>930_bases
ATGAAAGCGAAAAAGAGAAAAGAACAAACATTTCATGAGTATTTTAAAGAATGGGTAAATCTTTATAAAGTTGGAGCAAT
ACGTTCAATTACCTTACAGAAATACTATGTAACAGAACAAAAAATCCAAGAACTGGCGCCAGATTTAAGAATTAAGGATC
TTGATCGTTATACTTATCAGCAACTGCTAAATAATTATGCACTTACTCATGAGAAACAAACAACTATGGATTTTCATCAT
CATTTGAAAGGCGCTATTTTAGATGCTGTAGACGAGGGTGTTCTCAGCCAAAACCCCACAAGGAAAATTGTGATTAAAGG
GAAAACGCCTCGATTAAAAAAAGCAAAATTTTTAAATCAATTTGAAGTTCAAGCATTATTAAAAGAATTAAATTTAAAAG
AAGATATAAATTGGGATTGGTTTATTCTATTAATCATTAAAACTGGGCTTCGATTTTCAGAAGCATTAGCTCTAACCCCT
TCAGACTTCGATTTTTCCAAGCAAAAAATTATTATTAACAAAACCTGGGATTACAAAATGGTTACTGGTTCTTTTCAGCC
GACAAAAAACGAATCTTCCAATAGAAAAATTCAAATTGATTGGCAATTAGCAATGCAATTTTCCCAGTTAATTAAAATGA
AAGATCCAGATAAACCAATTTTTGTTAAAAGTAGAGTATTTAATTCTACTATCAATAATCGTTTAAAAGTGTTGTGTGAA
AACGCCAATATACCAACTATCACTGTCCATAGTTTACGACATACCCATGCTTCTTTACTTTTATTTGCCGGAGTTTCGAT
TGCAAGCGTTGCGAATAGATTAGGGCATTCAAGTATGACTACTACTCAGGAAACATACCTTCATGTTATTCAGGAATTGG
AGAATCAAGATAATGATAAAATTATACGTCATTTATCAATGTTAATGTGA

Upstream 100 bases:

>100_bases
AACTATGTTCATTTAATTAAAACATTTACACTTAAACTAACTCCTAAGATAATAATAAAAGGTGATCAACTCATCTATTT
ATTATCTTAGGAGGTTTTTT

Downstream 100 bases:

>100_bases
TAAGAAATCCCCCATCTATTAAAACCAGATGGGGGATTTGAACTATATGAGCATATTTTGTAAATAGGTCTTTTTTAGAG
AAGAGAGTTTATTTATTTTG

Product: bacteriophage integrase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKAKKRKEQTFHEYFKEWVNLYKVGAIRSITLQKYYVTEQKIQELAPDLRIKDLDRYTYQQLLNNYALTHEKQTTMDFHH
HLKGAILDAVDEGVLSQNPTRKIVIKGKTPRLKKAKFLNQFEVQALLKELNLKEDINWDWFILLIIKTGLRFSEALALTP
SDFDFSKQKIIINKTWDYKMVTGSFQPTKNESSNRKIQIDWQLAMQFSQLIKMKDPDKPIFVKSRVFNSTINNRLKVLCE
NANIPTITVHSLRHTHASLLLFAGVSIASVANRLGHSSMTTTQETYLHVIQELENQDNDKIIRHLSMLM

Sequences:

>Translated_309_residues
MKAKKRKEQTFHEYFKEWVNLYKVGAIRSITLQKYYVTEQKIQELAPDLRIKDLDRYTYQQLLNNYALTHEKQTTMDFHH
HLKGAILDAVDEGVLSQNPTRKIVIKGKTPRLKKAKFLNQFEVQALLKELNLKEDINWDWFILLIIKTGLRFSEALALTP
SDFDFSKQKIIINKTWDYKMVTGSFQPTKNESSNRKIQIDWQLAMQFSQLIKMKDPDKPIFVKSRVFNSTINNRLKVLCE
NANIPTITVHSLRHTHASLLLFAGVSIASVANRLGHSSMTTTQETYLHVIQELENQDNDKIIRHLSMLM
>Mature_309_residues
MKAKKRKEQTFHEYFKEWVNLYKVGAIRSITLQKYYVTEQKIQELAPDLRIKDLDRYTYQQLLNNYALTHEKQTTMDFHH
HLKGAILDAVDEGVLSQNPTRKIVIKGKTPRLKKAKFLNQFEVQALLKELNLKEDINWDWFILLIIKTGLRFSEALALTP
SDFDFSKQKIIINKTWDYKMVTGSFQPTKNESSNRKIQIDWQLAMQFSQLIKMKDPDKPIFVKSRVFNSTINNRLKVLCE
NANIPTITVHSLRHTHASLLLFAGVSIASVANRLGHSSMTTTQETYLHVIQELENQDNDKIIRHLSMLM

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 36106; Mature: 36106

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKKRKEQTFHEYFKEWVNLYKVGAIRSITLQKYYVTEQKIQELAPDLRIKDLDRYTYQ
CCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHCCCCEEHHHHHHHHH
QLLNNYALTHEKQTTMDFHHHLKGAILDAVDEGVLSQNPTRKIVIKGKTPRLKKAKFLNQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHH
FEVQALLKELNLKEDINWDWFILLIIKTGLRFSEALALTPSDFDFSKQKIIINKTWDYKM
HHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCHHHEEEECCCCCCCCCCEEEEECCCCEEE
VTGSFQPTKNESSNRKIQIDWQLAMQFSQLIKMKDPDKPIFVKSRVFNSTINNRLKVLCE
EECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHEEEC
NANIPTITVHSLRHTHASLLLFAGVSIASVANRLGHSSMTTTQETYLHVIQELENQDNDK
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHH
IIRHLSMLM
HHHHHHHHC
>Mature Secondary Structure
MKAKKRKEQTFHEYFKEWVNLYKVGAIRSITLQKYYVTEQKIQELAPDLRIKDLDRYTYQ
CCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHCCCCEEHHHHHHHHH
QLLNNYALTHEKQTTMDFHHHLKGAILDAVDEGVLSQNPTRKIVIKGKTPRLKKAKFLNQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHH
FEVQALLKELNLKEDINWDWFILLIIKTGLRFSEALALTPSDFDFSKQKIIINKTWDYKM
HHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCHHHEEEECCCCCCCCCCEEEEECCCCEEE
VTGSFQPTKNESSNRKIQIDWQLAMQFSQLIKMKDPDKPIFVKSRVFNSTINNRLKVLCE
EECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHEEEC
NANIPTITVHSLRHTHASLLLFAGVSIASVANRLGHSSMTTTQETYLHVIQELENQDNDK
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHH
IIRHLSMLM
HHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]