| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is inlI [H]
Identifier: 116871891
GI number: 116871891
Start: 503325
End: 505193
Strand: Direct
Name: inlI [H]
Synonym: lwe0471
Alternate gene names: 116871891
Gene position: 503325-505193 (Clockwise)
Preceding gene: 116871888
Following gene: 116871892
Centisome position: 17.89
GC content: 35.63
Gene sequence:
>1869_bases ATGAAAAAAATTCTAAAAGTATTTCTCGCAACCCTGTGTATGTTCCTAATGATATATCCTTCCATCTCAGCTCAAGCAGA AGAAACATCTACTAATGTTAATATTCCTGATACCAATTTAAAGACCTATTTAAATGGATTACTTAAACAAGCGAGTGATG CACCTATTACAACAGACCAAATGGCTACTATTAAATCTATCACACTATCAGGTGCGAATTATAGCGATTTAACAGGTCTA GAAGCAGCATCAAACCTTGAAACACTTAGTATTAATAACACGAGCATCCAAACACTAGCACCAATTAAAAATGTGGAATC TTTATCTTACTTAACGGTTGGTGGAGACAATGTAACAGATAGTACGTTTGTTGATTTACATGCTTTAGTTAACTTGAAAA GTATAAGTATTAGCAGTAAAAATGTTAGTCATAAAGTTTTCAATAGTTTTAATAAATTACCTAACCTAACTTATCTATAT GCTCAAAATTCAATGAAAATTACGGATATTTCAGCTCTTGCTTCATTGCCAGCTTTAAATACGCTTTTCTTACAATTTGA TGGAATTGATGATTTTAGACCATTAAACGATTTTGAGAGTTTCAAAAATGGTAATTTAAAAGCACTTGCTGCATTCGGAC AAAACACGGGTAGAGAGAATCCGAGAATCACATTGAAGTCTGGAAAATTGGATTTTGATGAAGCGAATCAAACCTTATTC TTGCCATTTTCGATGATGCCAAAGCCATTAACTAGTTTCGATGGGACAGTAGCACCTTTTTCTAAATCCAACTCTGCAAG TAATACGTATTTAGGATTTAATGATGTGGCATTACCAAGTTCGCGCCTTGCAATTACTGACGAAGGTATTACTGTAAGTG GCGTAACAAAAGAAGAATTTGATAACCTAACTGAAATCGAATATAATGCACGTTATGATTTCCCAACTGGAAGCTATCCA ACTCCGCCAAATATGAATTCTTACGTTGTTTCGAGTGGAACATACGATCAGTATTTCGATATTAGTCACACGTTAGATTT AACAGCGGATGAAAACTATGATTACAATCAATATGACGCCATTTCTGAAGAACAATTTTTAAAAGACGTTCAAGCAAAAA CGGACGATGGAACGGCTGTTCAAAGCGATTTTAACCAAGTAGTTAAATTAGACGTACCAGCCGAATACACCGTAACTTTA AATGCTGAAAATAGTGCTGGTCTAAAAGCGGATCCAATAAAAGTAAAAGTAGTTGTTCATGAAAAACCAGTTATCACAGC AGATCCGACAATTTCTTATAAACAAGCCACTACTACTAAATCAGTAGATGAATTTTTAACAGAAATTAAGTCATCTGTTA CAGGAAATGGCGTGATTACCAGTGATTTTGATAAAGTGGTAGATTTAACGACACCTGGCGAATATACCGTGACTTTAAAT GCAACAAATAATCGTGGTCAACAAGCCGATCCAGTAACTGTTATTGTAGTAGTAACAAGTGAGGAAAACCCGACTAAGCC AGATACTGATGATAAACCAAAACCGGATCCAGAAGATAAGCCGAAACCAACTCCAGAAGAAAAACCTAAAGCGGAGAATT CTGGAAAAGAAGAAGTATTCGGTGAGAACTCTGAAGCGGCACCGCAAGAAAATCAAACAGAAAAATCAAGTGCATTAACA ACTAAAGAACAGCCGACTCAAAAAACAGTCAGTCAATTCGAAAAAAATCAAACGGAATCAAAGCAAACCAAAACAAACAA AGCACTTCCAAAAACAGGGGATAGCGGATTAGGAGCTATACCAGTTGTAGCTGTAGGAACATTGTTTGGTCTAACGGCAC TGGTGCTTTTACGAAAACGTAATTCGTAA
Upstream 100 bases:
>100_bases TTAAAAGACTAAAAGTTGTTTTTTCTGTTCAAAACGTATTGAAGCATGTTTTTTACCAAGGTATACTTTGGAAAGAAATT AATTACGAAGGAGACTATAT
Downstream 100 bases:
>100_bases ACTATGTGAATTTAATAGCAAAAATTAATGATAATGAGGCCTAAATTTCTCTTTATAGGGTAAAAGATACTATAAGAAAA GTTTATGGGAGGTTTGTGTT
Product: cell wall surface anchor family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MKKILKVFLATLCMFLMIYPSISAQAEETSTNVNIPDTNLKTYLNGLLKQASDAPITTDQMATIKSITLSGANYSDLTGL EAASNLETLSINNTSIQTLAPIKNVESLSYLTVGGDNVTDSTFVDLHALVNLKSISISSKNVSHKVFNSFNKLPNLTYLY AQNSMKITDISALASLPALNTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNTGRENPRITLKSGKLDFDEANQTLF LPFSMMPKPLTSFDGTVAPFSKSNSASNTYLGFNDVALPSSRLAITDEGITVSGVTKEEFDNLTEIEYNARYDFPTGSYP TPPNMNSYVVSSGTYDQYFDISHTLDLTADENYDYNQYDAISEEQFLKDVQAKTDDGTAVQSDFNQVVKLDVPAEYTVTL NAENSAGLKADPIKVKVVVHEKPVITADPTISYKQATTTKSVDEFLTEIKSSVTGNGVITSDFDKVVDLTTPGEYTVTLN ATNNRGQQADPVTVIVVVTSEENPTKPDTDDKPKPDPEDKPKPTPEEKPKAENSGKEEVFGENSEAAPQENQTEKSSALT TKEQPTQKTVSQFEKNQTESKQTKTNKALPKTGDSGLGAIPVVAVGTLFGLTALVLLRKRNS
Sequences:
>Translated_622_residues MKKILKVFLATLCMFLMIYPSISAQAEETSTNVNIPDTNLKTYLNGLLKQASDAPITTDQMATIKSITLSGANYSDLTGL EAASNLETLSINNTSIQTLAPIKNVESLSYLTVGGDNVTDSTFVDLHALVNLKSISISSKNVSHKVFNSFNKLPNLTYLY AQNSMKITDISALASLPALNTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNTGRENPRITLKSGKLDFDEANQTLF LPFSMMPKPLTSFDGTVAPFSKSNSASNTYLGFNDVALPSSRLAITDEGITVSGVTKEEFDNLTEIEYNARYDFPTGSYP TPPNMNSYVVSSGTYDQYFDISHTLDLTADENYDYNQYDAISEEQFLKDVQAKTDDGTAVQSDFNQVVKLDVPAEYTVTL NAENSAGLKADPIKVKVVVHEKPVITADPTISYKQATTTKSVDEFLTEIKSSVTGNGVITSDFDKVVDLTTPGEYTVTLN ATNNRGQQADPVTVIVVVTSEENPTKPDTDDKPKPDPEDKPKPTPEEKPKAENSGKEEVFGENSEAAPQENQTEKSSALT TKEQPTQKTVSQFEKNQTESKQTKTNKALPKTGDSGLGAIPVVAVGTLFGLTALVLLRKRNS >Mature_622_residues MKKILKVFLATLCMFLMIYPSISAQAEETSTNVNIPDTNLKTYLNGLLKQASDAPITTDQMATIKSITLSGANYSDLTGL EAASNLETLSINNTSIQTLAPIKNVESLSYLTVGGDNVTDSTFVDLHALVNLKSISISSKNVSHKVFNSFNKLPNLTYLY AQNSMKITDISALASLPALNTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNTGRENPRITLKSGKLDFDEANQTLF LPFSMMPKPLTSFDGTVAPFSKSNSASNTYLGFNDVALPSSRLAITDEGITVSGVTKEEFDNLTEIEYNARYDFPTGSYP TPPNMNSYVVSSGTYDQYFDISHTLDLTADENYDYNQYDAISEEQFLKDVQAKTDDGTAVQSDFNQVVKLDVPAEYTVTL NAENSAGLKADPIKVKVVVHEKPVITADPTISYKQATTTKSVDEFLTEIKSSVTGNGVITSDFDKVVDLTTPGEYTVTLN ATNNRGQQADPVTVIVVVTSEENPTKPDTDDKPKPDPEDKPKPTPEEKPKAENSGKEEVFGENSEAAPQENQTEKSSALT TKEQPTQKTVSQFEKNQTESKQTKTNKALPKTGDSGLGAIPVVAVGTLFGLTALVLLRKRNS
Specific function: Unknown. A role in virulence could not be demonstrated [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 MucBP domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014755 - InterPro: IPR014756 - InterPro: IPR001611 - InterPro: IPR019931 - InterPro: IPR012569 - InterPro: IPR000601 - InterPro: IPR001899 [H]
Pfam domain/function: PF00560 LRR_1; PF08191 LRR_adjacent [H]
EC number: NA
Molecular weight: Translated: 67727; Mature: 67727
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS50847 GRAM_POS_ANCHORING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILKVFLATLCMFLMIYPSISAQAEETSTNVNIPDTNLKTYLNGLLKQASDAPITTDQ CHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHH MATIKSITLSGANYSDLTGLEAASNLETLSINNTSIQTLAPIKNVESLSYLTVGGDNVTD HHEEEEEEECCCCCCCCCCCHHHCCCEEEEECCCCCEEECCCCCCCCEEEEEECCCCCCC STFVDLHALVNLKSISISSKNVSHKVFNSFNKLPNLTYLYAQNSMKITDISALASLPALN CHHHHHHHHEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCEEEEHHHHHHHCCCCE TLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNTGRENPRITLKSGKLDFDEANQTLF EEEEEECCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEE LPFSMMPKPLTSFDGTVAPFSKSNSASNTYLGFNDVALPSSRLAITDEGITVSGVTKEEF EEHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCEEEECCCHHHH DNLTEIEYNARYDFPTGSYPTPPNMNSYVVSSGTYDQYFDISHTLDLTADENYDYNQYDA CCCEEEEECEEECCCCCCCCCCCCCCCEEEECCCCCCEECCCEEEEEEECCCCCCCHHCC ISEEQFLKDVQAKTDDGTAVQSDFNQVVKLDVPAEYTVTLNAENSAGLKADPIKVKVVVH CCHHHHHHHHHCCCCCCCHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCCEEEEEEEE EKPVITADPTISYKQATTTKSVDEFLTEIKSSVTGNGVITSDFDKVVDLTTPGEYTVTLN CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHEEEECCCCCEEEEEE ATNNRGQQADPVTVIVVVTSEENPTKPDTDDKPKPDPEDKPKPTPEEKPKAENSGKEEVF CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC GENSEAAPQENQTEKSSALTTKEQPTQKTVSQFEKNQTESKQTKTNKALPKTGDSGLGAI CCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH PVVAVGTLFGLTALVLLRKRNS HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKILKVFLATLCMFLMIYPSISAQAEETSTNVNIPDTNLKTYLNGLLKQASDAPITTDQ CHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHH MATIKSITLSGANYSDLTGLEAASNLETLSINNTSIQTLAPIKNVESLSYLTVGGDNVTD HHEEEEEEECCCCCCCCCCCHHHCCCEEEEECCCCCEEECCCCCCCCEEEEEECCCCCCC STFVDLHALVNLKSISISSKNVSHKVFNSFNKLPNLTYLYAQNSMKITDISALASLPALN CHHHHHHHHEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCEEEEHHHHHHHCCCCE TLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNTGRENPRITLKSGKLDFDEANQTLF EEEEEECCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEE LPFSMMPKPLTSFDGTVAPFSKSNSASNTYLGFNDVALPSSRLAITDEGITVSGVTKEEF EEHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCEEEECCCHHHH DNLTEIEYNARYDFPTGSYPTPPNMNSYVVSSGTYDQYFDISHTLDLTADENYDYNQYDA CCCEEEEECEEECCCCCCCCCCCCCCCEEEECCCCCCEECCCEEEEEEECCCCCCCHHCC ISEEQFLKDVQAKTDDGTAVQSDFNQVVKLDVPAEYTVTLNAENSAGLKADPIKVKVVVH CCHHHHHHHHHCCCCCCCHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCCEEEEEEEE EKPVITADPTISYKQATTTKSVDEFLTEIKSSVTGNGVITSDFDKVVDLTTPGEYTVTLN CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHEEEECCCCCEEEEEE ATNNRGQQADPVTVIVVVTSEENPTKPDTDDKPKPDPEDKPKPTPEEKPKAENSGKEEVF CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC GENSEAAPQENQTEKSSALTTKEQPTQKTVSQFEKNQTESKQTKTNKALPKTGDSGLGAI CCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH PVVAVGTLFGLTALVLLRKRNS HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]