| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871847
Identifier: 116871847
GI number: 116871847
Start: 448986
End: 449549
Strand: Direct
Name: 116871847
Synonym: lwe0427
Alternate gene names: NA
Gene position: 448986-449549 (Clockwise)
Preceding gene: 116871846
Following gene: 116871848
Centisome position: 15.95
GC content: 33.33
Gene sequence:
>564_bases ATGACAAATGAATTTTTTAATACTTTATTATTAATTATTGCGTTGTTATTAGCCTTTTTTATAGCTGTATTGGCAATTCT CGCTGGTATTCGTCATTTTTTATCCAAAGATGCCGTGCCATTAGAGCGAATTCGCCGGTATCAGTCATGGCTTAATCGTT ATCAACTTAATCCAGAAACAACATCGTTTCTGGTGATTATCAGTGCCACTTTCTTAATATGTATTTTCACAGTTCAAATA GCTGTGATTCCTTTTCCGTTCACATTACTAATATTCTGGAGTAGCTGGTTATTTCAATTATTTTCTTTTTGGAAAAAAAT ACGGGTGCCTCAGAAAATGAAAATCGAAGTTATACGTATTATCGGTTTACTCCTAATCACTGCTCTTTATTTTGCAGGTT ACTTTGCAATTAACGCACTGCATCTTTTCATTACACAAATAGCAGACTTACCATTAATAGAGCAGGCAGGGTTAAGAATT TACTTTGTAGTTTATAGCCTTTTGGTAGCAATTATCTCGTTGTTTTTATGGCAACGAATTTATGCGAAAATGTTAAACCA GTAA
Upstream 100 bases:
>100_bases GCAAATATTATGGCTCAATTTGCTTCAGCAGATGCCGAGCAAGCAGAGCGTATTTTTGAAAGGCTCAACAAGCGAAAGCA CACAGAAAGTAGGCGAACTA
Downstream 100 bases:
>100_bases TAGTAAAGCAAAGGCGTAAGTTCATAAAGAAAGTAATTCTATTTCGTGACATTGAATATGATTAATAGAAATTATTAATT AGACTATTAGAAATTAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTNEFFNTLLLIIALLLAFFIAVLAILAGIRHFLSKDAVPLERIRRYQSWLNRYQLNPETTSFLVIISATFLICIFTVQI AVIPFPFTLLIFWSSWLFQLFSFWKKIRVPQKMKIEVIRIIGLLLITALYFAGYFAINALHLFITQIADLPLIEQAGLRI YFVVYSLLVAIISLFLWQRIYAKMLNQ
Sequences:
>Translated_187_residues MTNEFFNTLLLIIALLLAFFIAVLAILAGIRHFLSKDAVPLERIRRYQSWLNRYQLNPETTSFLVIISATFLICIFTVQI AVIPFPFTLLIFWSSWLFQLFSFWKKIRVPQKMKIEVIRIIGLLLITALYFAGYFAINALHLFITQIADLPLIEQAGLRI YFVVYSLLVAIISLFLWQRIYAKMLNQ >Mature_186_residues TNEFFNTLLLIIALLLAFFIAVLAILAGIRHFLSKDAVPLERIRRYQSWLNRYQLNPETTSFLVIISATFLICIFTVQIA VIPFPFTLLIFWSSWLFQLFSFWKKIRVPQKMKIEVIRIIGLLLITALYFAGYFAINALHLFITQIADLPLIEQAGLRIY FVVYSLLVAIISLFLWQRIYAKMLNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21857; Mature: 21726
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNEFFNTLLLIIALLLAFFIAVLAILAGIRHFLSKDAVPLERIRRYQSWLNRYQLNPET CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCH TSFLVIISATFLICIFTVQIAVIPFPFTLLIFWSSWLFQLFSFWKKIRVPQKMKIEVIRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH IGLLLITALYFAGYFAINALHLFITQIADLPLIEQAGLRIYFVVYSLLVAIISLFLWQRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHH YAKMLNQ HHHHHCC >Mature Secondary Structure TNEFFNTLLLIIALLLAFFIAVLAILAGIRHFLSKDAVPLERIRRYQSWLNRYQLNPET CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCH TSFLVIISATFLICIFTVQIAVIPFPFTLLIFWSSWLFQLFSFWKKIRVPQKMKIEVIRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH IGLLLITALYFAGYFAINALHLFITQIADLPLIEQAGLRIYFVVYSLLVAIISLFLWQRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHH YAKMLNQ HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA