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The map label for this gene is 116871799

Identifier: 116871799

GI number: 116871799

Start: 392866

End: 393069

Strand: Direct

Name: 116871799

Synonym: lwe0379

Alternate gene names: NA

Gene position: 392866-393069 (Clockwise)

Preceding gene: 116871798

Following gene: 116871800

Centisome position: 13.96

GC content: 31.37

Gene sequence:

>204_bases
ATGAAAGTAATAAATAAAGTGAAAGAAATACGGACAGAAAAAGGTATTTCACAGACTGATTTAGCCTTAACTTTAGAAGT
TTCGAGACAAACTATTCATGCTATTGAAAAAGGAAAATATAATCCAAGCCTGGAGTTAAGCCTAAAGATGGCGCAATATT
TTCATTTAACAATTGAAGAGATTTTCAAACTGGAGGAGAACTAA

Upstream 100 bases:

>100_bases
ATCATTTTGGCTATCACTTTTTTTGTGTAAAGATTTCTTTACAGTTTTAATAATATATTTTATAATGAATGTAAAGATAT
CTATACATGGCGGTGAGTGC

Downstream 100 bases:

>100_bases
CATGAGACAATACAAAGTAAAAAGAGTACTAACAATTATAGTTGCTTGCCTTTATTCATTTATGTTGATGAGGATTGTTC
AAGGAGTGAATTTATTTGGA

Product: DNA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MKVINKVKEIRTEKGISQTDLALTLEVSRQTIHAIEKGKYNPSLELSLKMAQYFHLTIEEIFKLEEN

Sequences:

>Translated_67_residues
MKVINKVKEIRTEKGISQTDLALTLEVSRQTIHAIEKGKYNPSLELSLKMAQYFHLTIEEIFKLEEN
>Mature_67_residues
MKVINKVKEIRTEKGISQTDLALTLEVSRQTIHAIEKGKYNPSLELSLKMAQYFHLTIEEIFKLEEN

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7790; Mature: 7790

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVINKVKEIRTEKGISQTDLALTLEVSRQTIHAIEKGKYNPSLELSLKMAQYFHLTIEE
CCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHH
IFKLEEN
HHHCCCC
>Mature Secondary Structure
MKVINKVKEIRTEKGISQTDLALTLEVSRQTIHAIEKGKYNPSLELSLKMAQYFHLTIEE
CCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHH
IFKLEEN
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]