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The map label for this gene is yjeA [H]

Identifier: 116871798

GI number: 116871798

Start: 391340

End: 392740

Strand: Direct

Name: yjeA [H]

Synonym: lwe0378

Alternate gene names: 116871798

Gene position: 391340-392740 (Clockwise)

Preceding gene: 116871797

Following gene: 116871799

Centisome position: 13.91

GC content: 35.12

Gene sequence:

>1401_bases
GTGAAGAAAAGGTGGATTAGAATTTCACTAGTCGCTATTCTCATTATTGCCGTGGTTTTTATTGGTGTGAAGGGATTTCA
ACGATACCAATTTTCAAAGTCGCGCAACAAGGTAATAATGCAGATGGACAGACTAATGAAGGATCAAAGTGGAAGTGACT
TTCACCGTTTGGATAAGAAAGAGAATGGAGTAGAAATTATTTCTTATATTCCTAAAACTACTACGAAAAAAGACAACATT
ACTGTCCAGAAAGAAGTTAACAAAGCTGCTGATTTAGAAAGAAAGAAGCTTGATAATGAAAAGGATGAAGAAGGGATAAT
CTTTTATACTTTTCAAAAGCAGAAACTGGCAGAAAATGTTGTATCTTATAAAATTGAACAACATGAGTATGTAAAAGAAG
GGCAAACCAAATTAACACTTAAAAGTAAAAAAGACGTTTGCCAAAACATTGTGACAGATGCAGAAACAGGGGATCTGCTG
ACACTTGGGGAGGTTCTACTAAAAAGCAACGATACGAAATTTAACATTAAAACCGCAGTAGAACAAGAACTAATAAAATC
AGGGGATATTCCTTTAAAAGATATTGGGAATCTTGGGGAAATTAAAGGTATTACTAATTGGGAGGAAACTAATTTTGGGT
TAACAGATACAGATTTAATTTTACCAATTAATGTACCAGGTTATCCAAAATTAAAGAAAGTAAATTTAAAACTGGCTGAT
ATTGCGAGCTATGTAAACAAAAAATATATACCAGCTGGTGTAGAGATTCCATCAGCGCAAAAAGCAGTATCAGGTAAGAA
AATTGCACTTACTTTTGACGATGGCCCGAGCCAGACAGTTACACCAAAAGTACTCGCTACACTGAAACGATACAACGCAA
AGGCAACATTCTTTGTTCTTGGTTCACGAGTACTAGAAAATCCGGATTTGGTGAAACAAGAACTTGATGAAGGGCATCAA
GTGGGAAGTCATTCATGGGATCATCCGCAATTAACGAAGCTTTCTAATAAAGAAGTGTATGACCAAATTTTAAAAACACA
AAAAGTGGTTTTTGATCAAACTGGGTATTTTCCGACAACGATGCGTCCACCTTATGGCGCAATAAATAAAGAGGTTGCGG
AAGAAATTGGTATTCCAATCGTGCAGTGGTCTGTGGACACAGAAGATTGGAAAATTAAAAATCCAAAAGCAGTTACAAAG
AAAGTAATGGCGAACGCATCGGATGGAGCAATTGTACTTATGCATGATATTCACCCAACAACAGGAGATAGCCTAGATAA
AACGCTGAAACTATTAAAAAAACAAGGCTATCAATTTGTAACTGTAAATGAACTATACAATGAAAAATTAAAAATTGGTA
AACAATATTTCGATGCAAATGATTCCAGAATGGTAAAATGA

Upstream 100 bases:

>100_bases
CTTCCTGTTTTAGTACAAAAACTAGAATCTTGTGTATATTCCTGTATAATTGGTGTATAAGAGAAACTGGGGAAGGTTTT
TCTTAGGTGAGGTGTATAAT

Downstream 100 bases:

>100_bases
AAAAAAGTGGTAGTTGAAATGAGCAATCATTTTGGCTATCACTTTTTTTGTGTAAAGATTTCTTTACAGTTTTAATAATA
TATTTTATAATGAATGTAAA

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MKKRWIRISLVAILIIAVVFIGVKGFQRYQFSKSRNKVIMQMDRLMKDQSGSDFHRLDKKENGVEIISYIPKTTTKKDNI
TVQKEVNKAADLERKKLDNEKDEEGIIFYTFQKQKLAENVVSYKIEQHEYVKEGQTKLTLKSKKDVCQNIVTDAETGDLL
TLGEVLLKSNDTKFNIKTAVEQELIKSGDIPLKDIGNLGEIKGITNWEETNFGLTDTDLILPINVPGYPKLKKVNLKLAD
IASYVNKKYIPAGVEIPSAQKAVSGKKIALTFDDGPSQTVTPKVLATLKRYNAKATFFVLGSRVLENPDLVKQELDEGHQ
VGSHSWDHPQLTKLSNKEVYDQILKTQKVVFDQTGYFPTTMRPPYGAINKEVAEEIGIPIVQWSVDTEDWKIKNPKAVTK
KVMANASDGAIVLMHDIHPTTGDSLDKTLKLLKKQGYQFVTVNELYNEKLKIGKQYFDANDSRMVK

Sequences:

>Translated_466_residues
MKKRWIRISLVAILIIAVVFIGVKGFQRYQFSKSRNKVIMQMDRLMKDQSGSDFHRLDKKENGVEIISYIPKTTTKKDNI
TVQKEVNKAADLERKKLDNEKDEEGIIFYTFQKQKLAENVVSYKIEQHEYVKEGQTKLTLKSKKDVCQNIVTDAETGDLL
TLGEVLLKSNDTKFNIKTAVEQELIKSGDIPLKDIGNLGEIKGITNWEETNFGLTDTDLILPINVPGYPKLKKVNLKLAD
IASYVNKKYIPAGVEIPSAQKAVSGKKIALTFDDGPSQTVTPKVLATLKRYNAKATFFVLGSRVLENPDLVKQELDEGHQ
VGSHSWDHPQLTKLSNKEVYDQILKTQKVVFDQTGYFPTTMRPPYGAINKEVAEEIGIPIVQWSVDTEDWKIKNPKAVTK
KVMANASDGAIVLMHDIHPTTGDSLDKTLKLLKKQGYQFVTVNELYNEKLKIGKQYFDANDSRMVK
>Mature_466_residues
MKKRWIRISLVAILIIAVVFIGVKGFQRYQFSKSRNKVIMQMDRLMKDQSGSDFHRLDKKENGVEIISYIPKTTTKKDNI
TVQKEVNKAADLERKKLDNEKDEEGIIFYTFQKQKLAENVVSYKIEQHEYVKEGQTKLTLKSKKDVCQNIVTDAETGDLL
TLGEVLLKSNDTKFNIKTAVEQELIKSGDIPLKDIGNLGEIKGITNWEETNFGLTDTDLILPINVPGYPKLKKVNLKLAD
IASYVNKKYIPAGVEIPSAQKAVSGKKIALTFDDGPSQTVTPKVLATLKRYNAKATFFVLGSRVLENPDLVKQELDEGHQ
VGSHSWDHPQLTKLSNKEVYDQILKTQKVVFDQTGYFPTTMRPPYGAINKEVAEEIGIPIVQWSVDTEDWKIKNPKAVTK
KVMANASDGAIVLMHDIHPTTGDSLDKTLKLLKKQGYQFVTVNELYNEKLKIGKQYFDANDSRMVK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=133, Percent_Identity=39.8496240601504, Blast_Score=103, Evalue=6e-23,
Organism=Saccharomyces cerevisiae, GI6323339, Length=192, Percent_Identity=31.7708333333333, Blast_Score=94, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 52711; Mature: 52711

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRWIRISLVAILIIAVVFIGVKGFQRYQFSKSRNKVIMQMDRLMKDQSGSDFHRLDKK
CCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
ENGVEIISYIPKTTTKKDNITVQKEVNKAADLERKKLDNEKDEEGIIFYTFQKQKLAENV
CCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHH
VSYKIEQHEYVKEGQTKLTLKSKKDVCQNIVTDAETGDLLTLGEVLLKSNDTKFNIKTAV
HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEHHHH
EQELIKSGDIPLKDIGNLGEIKGITNWEETNFGLTDTDLILPINVPGYPKLKKVNLKLAD
HHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCHHHH
IASYVNKKYIPAGVEIPSAQKAVSGKKIALTFDDGPSQTVTPKVLATLKRYNAKATFFVL
HHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEE
GSRVLENPDLVKQELDEGHQVGSHSWDHPQLTKLSNKEVYDQILKTQKVVFDQTGYFPTT
CHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
MRPPYGAINKEVAEEIGIPIVQWSVDTEDWKIKNPKAVTKKVMANASDGAIVLMHDIHPT
CCCCCCHHHHHHHHHHCCEEEEEECCCCCCEECCCHHHHHHHHCCCCCCEEEEEECCCCC
TGDSLDKTLKLLKKQGYQFVTVNELYNEKLKIGKQYFDANDSRMVK
CCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKRWIRISLVAILIIAVVFIGVKGFQRYQFSKSRNKVIMQMDRLMKDQSGSDFHRLDKK
CCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
ENGVEIISYIPKTTTKKDNITVQKEVNKAADLERKKLDNEKDEEGIIFYTFQKQKLAENV
CCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHH
VSYKIEQHEYVKEGQTKLTLKSKKDVCQNIVTDAETGDLLTLGEVLLKSNDTKFNIKTAV
HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEHHHH
EQELIKSGDIPLKDIGNLGEIKGITNWEETNFGLTDTDLILPINVPGYPKLKKVNLKLAD
HHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCHHHH
IASYVNKKYIPAGVEIPSAQKAVSGKKIALTFDDGPSQTVTPKVLATLKRYNAKATFFVL
HHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEE
GSRVLENPDLVKQELDEGHQVGSHSWDHPQLTKLSNKEVYDQILKTQKVVFDQTGYFPTT
CHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
MRPPYGAINKEVAEEIGIPIVQWSVDTEDWKIKNPKAVTKKVMANASDGAIVLMHDIHPT
CCCCCCHHHHHHHHHHCCEEEEEECCCCCCEECCCHHHHHHHHCCCCCCEEEEEECCCCC
TGDSLDKTLKLLKKQGYQFVTVNELYNEKLKIGKQYFDANDSRMVK
CCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]