| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871777
Identifier: 116871777
GI number: 116871777
Start: 374642
End: 375268
Strand: Direct
Name: 116871777
Synonym: lwe0357
Alternate gene names: NA
Gene position: 374642-375268 (Clockwise)
Preceding gene: 116871776
Following gene: 116871778
Centisome position: 13.31
GC content: 30.3
Gene sequence:
>627_bases TTGAAAAAAATAAGCTGGGTGATTATTATACTGATTATCATAGTTGCATCAGTAGGCTATTATTTTATAAAAGAAAATGA AAAAAAGACCCCTCAAACAATTTCCTATAAAACGGTAGAGGCTAAAAAAACAGATTTGCAAGTCCATGTTTCTGCGGAAG GTCATGTAAAAAAAACAGCAAATGAATGGCCAGATTATAAAGATTTCGTAGTACAAGTGATGGTTGACGAGCTAGAAATC AACCAAATAAAAGAAAAACAAACGACAGATGTGAATGTTCAAGCTGTAGATAATAAAATTTACAAAGGGACAGTCGCAAA AATAAATGAAAAAGGTGTAATAAATGGCTCCGTGACATCCTATATCGTCACAATTAATTTAGAAAAAGAAAATAGTTTAA AAGAAAATATGTCCGTTAACGCAGATATACTTGTTGCTTTAGAAAAAAACGCTTTAATCATCCCAATTGAAGCTGTTTAT ACAGATAAAGCAGACAAAAAATATGTATTTATTGTTGATGAAAATAAGCAAAAAAAGAAAATATGGATTGAAACAGGGAA ACATAATACGAAATCTATTCAAGTAGTAAAAGGTCTTAGAAAGGGACAACAAGTGATTATTCCTTAG
Upstream 100 bases:
>100_bases CTATTTTCAAATCATGGAATTATGAGCAACTTAAAGATTGCTTTCAACACATTATGAATGCAATGATACTAATTGCTTTT TAAAGAGAGGTTTTTAACTA
Downstream 100 bases:
>100_bases ATGGAGGTTAGTGCAACATGATACAGCTTTTTAATATTTCAAAAACGTATCAAATGGGAGAAGATACGATAAAAGCATTA GATAATTTATCTTTACAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Biotin/Lipoyl Attachment Domain-Containing Protein; RND Family Efflux Transporter MFP Subunit; Membrane Permease Cation Efflux Pumps
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MKKISWVIIILIIIVASVGYYFIKENEKKTPQTISYKTVEAKKTDLQVHVSAEGHVKKTANEWPDYKDFVVQVMVDELEI NQIKEKQTTDVNVQAVDNKIYKGTVAKINEKGVINGSVTSYIVTINLEKENSLKENMSVNADILVALEKNALIIPIEAVY TDKADKKYVFIVDENKQKKKIWIETGKHNTKSIQVVKGLRKGQQVIIP
Sequences:
>Translated_208_residues MKKISWVIIILIIIVASVGYYFIKENEKKTPQTISYKTVEAKKTDLQVHVSAEGHVKKTANEWPDYKDFVVQVMVDELEI NQIKEKQTTDVNVQAVDNKIYKGTVAKINEKGVINGSVTSYIVTINLEKENSLKENMSVNADILVALEKNALIIPIEAVY TDKADKKYVFIVDENKQKKKIWIETGKHNTKSIQVVKGLRKGQQVIIP >Mature_208_residues MKKISWVIIILIIIVASVGYYFIKENEKKTPQTISYKTVEAKKTDLQVHVSAEGHVKKTANEWPDYKDFVVQVMVDELEI NQIKEKQTTDVNVQAVDNKIYKGTVAKINEKGVINGSVTSYIVTINLEKENSLKENMSVNADILVALEKNALIIPIEAVY TDKADKKYVFIVDENKQKKKIWIETGKHNTKSIQVVKGLRKGQQVIIP
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23617; Mature: 23617
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKISWVIIILIIIVASVGYYFIKENEKKTPQTISYKTVEAKKTDLQVHVSAEGHVKKTA CCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCEECCH NEWPDYKDFVVQVMVDELEINQIKEKQTTDVNVQAVDNKIYKGTVAKINEKGVINGSVTS HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECEEEEECCCCEECCCCEE YIVTINLEKENSLKENMSVNADILVALEKNALIIPIEAVYTDKADKKYVFIVDENKQKKK EEEEEEECCCCCHHHCCCCCCEEEEEEECCEEEEEEEEEECCCCCCEEEEEECCCCCCEE IWIETGKHNTKSIQVVKGLRKGQQVIIP EEEECCCCCCCHHHHHHHHHCCCEEECC >Mature Secondary Structure MKKISWVIIILIIIVASVGYYFIKENEKKTPQTISYKTVEAKKTDLQVHVSAEGHVKKTA CCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCEECCH NEWPDYKDFVVQVMVDELEINQIKEKQTTDVNVQAVDNKIYKGTVAKINEKGVINGSVTS HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECEEEEECCCCEECCCCEE YIVTINLEKENSLKENMSVNADILVALEKNALIIPIEAVYTDKADKKYVFIVDENKQKKK EEEEEEECCCCCHHHCCCCCCEEEEEEECCEEEEEEEEEECCCCCCEEEEEECCCCCCEE IWIETGKHNTKSIQVVKGLRKGQQVIIP EEEECCCCCCCHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA