| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871756
Identifier: 116871756
GI number: 116871756
Start: 358688
End: 359056
Strand: Direct
Name: 116871756
Synonym: lwe0336
Alternate gene names: NA
Gene position: 358688-359056 (Clockwise)
Preceding gene: 116871755
Following gene: 116871758
Centisome position: 12.75
GC content: 36.04
Gene sequence:
>369_bases ATGCGGATTTTTTGTGGAATTATGTCAATCCAAGCGGGCTTTATAGGTGCTCTTGCCGAATTACTAAGCCCGGGTAGTAA GAAGAATAACCTTTTTATGATACCAGAGAATCTGGCATCTTCTTCAGGATATTTAACGTCGCTAGCGATGATTTTAGCAG GAATTCTTATTATCTGTGCTTATCGAAATGACTTTCTCATATTTATGGCACTAGTTTTATGGCTTTTTGGACTCATATTT GGGCTCATATTTACCCCAAGCTATTCTGGTTTTTATTTTCGCCCAGTTGTATGTTTAATTAGCTTTTTAATGGGTCTGTT TATTTTTACTGATTATACAAGGCATCAAGATATAAGTGAGGAAAGGTGA
Upstream 100 bases:
>100_bases GGTATAAGTAATTTATAGTTACTTTGTCGCGTAGCAAATACAAATTATTTATGCCATAATAAATGAGCTAATATGTATTT TATTAAAAGAGTGGTGTAAA
Downstream 100 bases:
>100_bases GCGATATGCCCACCTTTTTTTGTTTAAACGCGAATTGGTTTGGAAGTTTGGTATTGCAATCCCAGGTCTAGCAAAGCACA AATCCAAATACTTACAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MRIFCGIMSIQAGFIGALAELLSPGSKKNNLFMIPENLASSSGYLTSLAMILAGILIICAYRNDFLIFMALVLWLFGLIF GLIFTPSYSGFYFRPVVCLISFLMGLFIFTDYTRHQDISEER
Sequences:
>Translated_122_residues MRIFCGIMSIQAGFIGALAELLSPGSKKNNLFMIPENLASSSGYLTSLAMILAGILIICAYRNDFLIFMALVLWLFGLIF GLIFTPSYSGFYFRPVVCLISFLMGLFIFTDYTRHQDISEER >Mature_122_residues MRIFCGIMSIQAGFIGALAELLSPGSKKNNLFMIPENLASSSGYLTSLAMILAGILIICAYRNDFLIFMALVLWLFGLIF GLIFTPSYSGFYFRPVVCLISFLMGLFIFTDYTRHQDISEER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13701; Mature: 13701
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFCGIMSIQAGFIGALAELLSPGSKKNNLFMIPENLASSSGYLTSLAMILAGILIICA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHCCCCCHHHHHHHHHHHHHHHHH YRNDFLIFMALVLWLFGLIFGLIFTPSYSGFYFRPVVCLISFLMGLFIFTDYTRHQDISE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ER CC >Mature Secondary Structure MRIFCGIMSIQAGFIGALAELLSPGSKKNNLFMIPENLASSSGYLTSLAMILAGILIICA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHCCCCCHHHHHHHHHHHHHHHHH YRNDFLIFMALVLWLFGLIFGLIFTPSYSGFYFRPVVCLISFLMGLFIFTDYTRHQDISE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ER CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA