| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is yjjG [C]
Identifier: 116871649
GI number: 116871649
Start: 244284
End: 244829
Strand: Direct
Name: yjjG [C]
Synonym: lwe0229
Alternate gene names: 116871649
Gene position: 244284-244829 (Clockwise)
Preceding gene: 116871648
Following gene: 116871650
Centisome position: 8.68
GC content: 37.91
Gene sequence:
>546_bases TTGATTACACATGTTATTTGGGATATGGGCGAAACATTAAATACTGTGCCAAACTCAAGATACGACCATCACCCTCTTGA TACTTATCCGGAAGTAGTGCTTCGTAAAGATGCTATAGAAACACTTGAGAAAGTAAAGCAACTCGGATTCAAACAAGCCA TTCTGAGCAATACTGCAACAAGTGACACAGAAGTGATTAAACGCGTGCTAACAAATTTTGGCATTATTGATTATTTTGAC TTCATTTACGCATCCAATTCTGAACTACAACCAGGAAAAATGGAAAAGCCAGATAAAACTATTTTTGACTTTACCTTAAA TGAGCTTAATATTGATAAAACAGCAGCGGTAATGGTCGGAAACACATTCGAAAGTGATATTATTGGAGCGAACCGTGCGG GTATCCATGCTATTTGGTTGCAAAATCCAGAAGTCTGTCTTCAAGAAGAGCGTTTGCCTCTTGTCGCTCCGCCATTTGTT ATACCAGTTTGGGACTTAGCAGATGTTCCCGAAGCTCTTTTATTATTAAACAAAATTTCTTCTTGA
Upstream 100 bases:
>100_bases TAACTGACGAAATCACAAATATTTAATTTTTTAAGCCAAGTGTACCATTCGCGTACACTTGGCTTTTTTTGTTATACTTT TAAAAAAGGAGTGAAGTGAT
Downstream 100 bases:
>100_bases CCTGTAATGCATTACATAGATTAAACTTGAAAAGTAGAAGAAATTAGCCGGAAGGGGCGAAAGAAATGACTGAAGTGAAA AAACAATTTCCAAAAGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MITHVIWDMGETLNTVPNSRYDHHPLDTYPEVVLRKDAIETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFD FIYASNSELQPGKMEKPDKTIFDFTLNELNIDKTAAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQEERLPLVAPPFV IPVWDLADVPEALLLLNKISS
Sequences:
>Translated_181_residues MITHVIWDMGETLNTVPNSRYDHHPLDTYPEVVLRKDAIETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFD FIYASNSELQPGKMEKPDKTIFDFTLNELNIDKTAAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQEERLPLVAPPFV IPVWDLADVPEALLLLNKISS >Mature_181_residues MITHVIWDMGETLNTVPNSRYDHHPLDTYPEVVLRKDAIETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFD FIYASNSELQPGKMEKPDKTIFDFTLNELNIDKTAAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQEERLPLVAPPFV IPVWDLADVPEALLLLNKISS
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20397; Mature: 20397
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITHVIWDMGETLNTVPNSRYDHHPLDTYPEVVLRKDAIETLEKVKQLGFKQAILSNTAT CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNELNIDKTAAVMVG CHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEC NTFESDIIGANRAGIHAIWLQNPEVCLQEERLPLVAPPFVIPVWDLADVPEALLLLNKIS CCCHHHCCCCCCCCEEEEEECCCHHHHHHCCCCEECCCCEEECCCHHHHHHHHHHHHHHC S C >Mature Secondary Structure MITHVIWDMGETLNTVPNSRYDHHPLDTYPEVVLRKDAIETLEKVKQLGFKQAILSNTAT CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNELNIDKTAAVMVG CHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEC NTFESDIIGANRAGIHAIWLQNPEVCLQEERLPLVAPPFVIPVWDLADVPEALLLLNKIS CCCHHHCCCCCCCCEEEEEECCCHHHHHHCCCCEECCCCEEECCCHHHHHHHHHHHHHHC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA