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The map label for this gene is hslR [C]

Identifier: 116871598

GI number: 116871598

Start: 179402

End: 179680

Strand: Direct

Name: hslR [C]

Synonym: lwe0178

Alternate gene names: 116871598

Gene position: 179402-179680 (Clockwise)

Preceding gene: 116871597

Following gene: 116871599

Centisome position: 6.38

GC content: 35.13

Gene sequence:

>279_bases
ATGGCAACAACTATGCGTTTAGATAAATATTTAAAAGTTTCTAGATTGATTAAAAGACGTACAGTAGCAAAAGAAGTAGC
AGAAAAAGGCCGCATTGCTGTCAACGGCGTAACTGCGAAACCAGGAACAAATGTAAAATCCGGTGATGAACTTGTGATTC
GATTCGGTCCAAAAATAGTTACTGCAAAAATAGAACGTCTAGAAGAAAATGCAAAAAAAGAACAAGCAACAGAAATGTAC
ACAATTTTAAAAGAAGAACGAACGGATGAAAGCAGATAA

Upstream 100 bases:

>100_bases
TTGGTCCAAAAGATTTCGTTTTTCTTCCGTTCGGTTCCAAATTACTTGCCCTTAGTAAAATGGTTGCACGGAAATAAATA
TTATAAAGTAGGTGATTAAA

Downstream 100 bases:

>100_bases
AGAAAAACGTTTGAAATCGCGCACCTTAGCCGATTTCAAACGTTTTTTTATTACGCTTAATAAAACACAAACAATTTTTG
ACAAAAAAGTCAAGAAAAAT

Product: S4 RNA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MATTMRLDKYLKVSRLIKRRTVAKEVAEKGRIAVNGVTAKPGTNVKSGDELVIRFGPKIVTAKIERLEENAKKEQATEMY
TILKEERTDESR

Sequences:

>Translated_92_residues
MATTMRLDKYLKVSRLIKRRTVAKEVAEKGRIAVNGVTAKPGTNVKSGDELVIRFGPKIVTAKIERLEENAKKEQATEMY
TILKEERTDESR
>Mature_91_residues
ATTMRLDKYLKVSRLIKRRTVAKEVAEKGRIAVNGVTAKPGTNVKSGDELVIRFGPKIVTAKIERLEENAKKEQATEMYT
ILKEERTDESR

Specific function: Involved In The Recycling Of Free 50s Ribosomal Subunits That Still Carry A Nascent Chain. Binds RNA More Specifically Than DNA. Binds With Very High Affinity To The Free 50s Ribosomal Subunit. Does Not Bind It When It Is Part Of The 70s Ribosome. [C]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 10435; Mature: 10304

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTMRLDKYLKVSRLIKRRTVAKEVAEKGRIAVNGVTAKPGTNVKSGDELVIRFGPKIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECEECCCCCCCCCCCEEEEEECCCHH
TAKIERLEENAKKEQATEMYTILKEERTDESR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ATTMRLDKYLKVSRLIKRRTVAKEVAEKGRIAVNGVTAKPGTNVKSGDELVIRFGPKIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECEECCCCCCCCCCCEEEEEECCCHH
TAKIERLEENAKKEQATEMYTILKEERTDESR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]