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The map label for this gene is yabM [H]

Identifier: 116871597

GI number: 116871597

Start: 177789

End: 179378

Strand: Direct

Name: yabM [H]

Synonym: lwe0177

Alternate gene names: 116871597

Gene position: 177789-179378 (Clockwise)

Preceding gene: 116871596

Following gene: 116871598

Centisome position: 6.32

GC content: 38.43

Gene sequence:

>1590_bases
ATGTCAGAACGTTCCATGAAGCGACTAATGAAAGGAGCAGCTTGGCTAACCGCTGCCTCGCTTATCTCTAAAATACTTAG
TGCAGTTTACCGAGTTCCTTTCCAAAACATGGTGGGAGATGTTGGCTTTTATATTTTTCAACAAGTATATCCGATTTACG
GAATTGCAATGACGCTTGCGCTTGGTGGATTTCCTGTTGTGATTTCTAAAATGCTAGCAGAGGCAGAAGGCGATTTAAGA
CGACAACAAATAATTATGCGTGCAGTACTTAGAATGCTCCGAATAGTGAGTGTTGCTTTATTTATATTCTTATTCTTGTT
TGCAGGTTTAATTGCAACTATGATGGGAGATCCAGCGCTTTCTGAACTAATACGTGTAATTAGTTTTGTGTTTTTACTTA
TGCCCAATCTTGCCTTTATGCGTGGTTATTTTCAAGGGAATGGCGATATGATACCAACGGCAATTTCTCAAACCGTGGAA
CAAATTATTCGTGTGGGTATCATTTTAATTGGCGCAGGTCTCGCTCTTCATATGGGACTTGATTTGTATGATGCAGGTTC
AATGGCCATGAGTGGCGCTTTTTTTGGTGGCGTTTCTGGAATCTTCATTTTACGACACTTTTATAATAAAAAAGTGGCAG
TTGGTGGTGGTTTACAACCTGCTGTATTTGCTAATAAGGAAGAAAAGGTGGGCATTGGTCGGATCTTTTTACGACAAAGT
GTGGCCATTTGTGTAGTTAGTTCAATGTTGATTTTATTTCAATTAGTGGACTCTTTCCAAGTTTACCGCTTAATGAGTGA
TTCAGGCATCCCTGATTTTATTGCGAAGTCACTCAAAGGAATATATGACCGTGGGCAACCAATTCTACAATTAGGACTTG
TGCTCTCAACAGGGCTTGCTCTTGCTTTAGTTCCAATGATTACAGCGGCAAGAGTTCAAAATCAACAAAAAGAACTCAAA
CGTTCCATTTTGTTAGCAATTAAAATTACTTTAATTTTATCGGGTGCGGAAACAGTGGGGCTAATTGTTATTATGCGGCC
GTTGAATCAAATGTTATTTCAGACGCCAGATGGAACATTGGTATTGCAACTATTTATGCCAGCAGTTTTCCTTAGCTCGT
TAATTGTGATGTTAAGCAGTATTTTACAAGGTTTTGGAAAAATAATCGTTCCAGCTGTTGGTGTTGGAATCGGTCTTATT
GTAAAATGGATTATAGGTAGCATTCTTATTCCGCAATTTGCGACTATTGGAGCCTCCATTTCGACATGTATTGGGTTGTT
TATTATCTGTATCATCTGTTATATTTCGCTTAAACAAACTATTCGCGTTCCATTTGTAGAAAAATCAATGATACTACGAT
TAATTGCAGCTTTAGCTTTAATGGCAGTTGTTCCGTGTTTATTTGAATGGTTAGCGCCATTTGATACTAGACTCGGAAGT
GCATTTCAGGCTATAACAAGTGCAGTCGTCGGTGGTGCAGTTTTCCTAGTATTTGCTTTAAGATACAAACTAATTGGTCC
AAAAGATTTCGTTTTTCTTCCGTTCGGTTCCAAATTACTTGCCCTTAGTAAAATGGTTGCACGGAAATAA

Upstream 100 bases:

>100_bases
TATCAAGTTAAAAGTCTGACTGAAAAACTTCGAGGAGCGATGAAAGAAAAAGTATCTTCCGAAAATTAATCAGTTATGAA
ACAAGAAAGGAGGTGGCGGA

Downstream 100 bases:

>100_bases
ATATTATAAAGTAGGTGATTAAAATGGCAACAACTATGCGTTTAGATAAATATTTAAAAGTTTCTAGATTGATTAAAAGA
CGTACAGTAGCAAAAGAAGT

Product: polysaccharide biosynthesis family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MSERSMKRLMKGAAWLTAASLISKILSAVYRVPFQNMVGDVGFYIFQQVYPIYGIAMTLALGGFPVVISKMLAEAEGDLR
RQQIIMRAVLRMLRIVSVALFIFLFLFAGLIATMMGDPALSELIRVISFVFLLMPNLAFMRGYFQGNGDMIPTAISQTVE
QIIRVGIILIGAGLALHMGLDLYDAGSMAMSGAFFGGVSGIFILRHFYNKKVAVGGGLQPAVFANKEEKVGIGRIFLRQS
VAICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAKSLKGIYDRGQPILQLGLVLSTGLALALVPMITAARVQNQQKELK
RSILLAIKITLILSGAETVGLIVIMRPLNQMLFQTPDGTLVLQLFMPAVFLSSLIVMLSSILQGFGKIIVPAVGVGIGLI
VKWIIGSILIPQFATIGASISTCIGLFIICIICYISLKQTIRVPFVEKSMILRLIAALALMAVVPCLFEWLAPFDTRLGS
AFQAITSAVVGGAVFLVFALRYKLIGPKDFVFLPFGSKLLALSKMVARK

Sequences:

>Translated_529_residues
MSERSMKRLMKGAAWLTAASLISKILSAVYRVPFQNMVGDVGFYIFQQVYPIYGIAMTLALGGFPVVISKMLAEAEGDLR
RQQIIMRAVLRMLRIVSVALFIFLFLFAGLIATMMGDPALSELIRVISFVFLLMPNLAFMRGYFQGNGDMIPTAISQTVE
QIIRVGIILIGAGLALHMGLDLYDAGSMAMSGAFFGGVSGIFILRHFYNKKVAVGGGLQPAVFANKEEKVGIGRIFLRQS
VAICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAKSLKGIYDRGQPILQLGLVLSTGLALALVPMITAARVQNQQKELK
RSILLAIKITLILSGAETVGLIVIMRPLNQMLFQTPDGTLVLQLFMPAVFLSSLIVMLSSILQGFGKIIVPAVGVGIGLI
VKWIIGSILIPQFATIGASISTCIGLFIICIICYISLKQTIRVPFVEKSMILRLIAALALMAVVPCLFEWLAPFDTRLGS
AFQAITSAVVGGAVFLVFALRYKLIGPKDFVFLPFGSKLLALSKMVARK
>Mature_528_residues
SERSMKRLMKGAAWLTAASLISKILSAVYRVPFQNMVGDVGFYIFQQVYPIYGIAMTLALGGFPVVISKMLAEAEGDLRR
QQIIMRAVLRMLRIVSVALFIFLFLFAGLIATMMGDPALSELIRVISFVFLLMPNLAFMRGYFQGNGDMIPTAISQTVEQ
IIRVGIILIGAGLALHMGLDLYDAGSMAMSGAFFGGVSGIFILRHFYNKKVAVGGGLQPAVFANKEEKVGIGRIFLRQSV
AICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAKSLKGIYDRGQPILQLGLVLSTGLALALVPMITAARVQNQQKELKR
SILLAIKITLILSGAETVGLIVIMRPLNQMLFQTPDGTLVLQLFMPAVFLSSLIVMLSSILQGFGKIIVPAVGVGIGLIV
KWIIGSILIPQFATIGASISTCIGLFIICIICYISLKQTIRVPFVEKSMILRLIAALALMAVVPCLFEWLAPFDTRLGSA
FQAITSAVVGGAVFLVFALRYKLIGPKDFVFLPFGSKLLALSKMVARK

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 57516; Mature: 57385

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SERSMKRLMKGAAWLTAASLISKILSAVYRVPFQNMVGDVGFYIFQQVYPIYGIAMTLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]