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The map label for this gene is yhbQ [C]

Identifier: 116871567

GI number: 116871567

Start: 147653

End: 147925

Strand: Direct

Name: yhbQ [C]

Synonym: lwe0147

Alternate gene names: 116871567

Gene position: 147653-147925 (Clockwise)

Preceding gene: 116871566

Following gene: 116871568

Centisome position: 5.25

GC content: 39.19

Gene sequence:

>273_bases
ATGGCGAAAGCGAATGAACATTTCTTTTATGTACTAAAATGTAACGACAATTCTTATTATGGTGGCTATACGACTGATGT
GACACGCCGAGAAGCCGAACACAATGCTGGCATTAGGTGCAAATACACTAAAACTCGACGTCCAGTAAAAGTCATTCATT
TTGAAAAATTTGAAACGAGAAGTGAGGCCACGAAGGCAGAAGCTGCATTCAAAAAACTATCACGTAAAAATAAAGACAGC
TATTTAATCGAGCGGGAGGAGGATTCAGAATGA

Upstream 100 bases:

>100_bases
GAAGGAATCAAAGACGGCAAGCCAGGTGTTAAGTATGTGCCGCCTGTTATTGTTTATGACGAGTTAGGCGAATATACACC
AGTAATTAAGGAGATTTTAT

Downstream 100 bases:

>100_bases
TAAAGAGTCAAAAAAGTTTCAGCGGAGACGTTCGAGGAGCACTGTACTTAGTTCCAACACCAATAGGAAATTTAGAAGAT
ATGACATTTCGGGCGATTCG

Product: GIY-YIG nuclease superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MAKANEHFFYVLKCNDNSYYGGYTTDVTRREAEHNAGIRCKYTKTRRPVKVIHFEKFETRSEATKAEAAFKKLSRKNKDS
YLIEREEDSE

Sequences:

>Translated_90_residues
MAKANEHFFYVLKCNDNSYYGGYTTDVTRREAEHNAGIRCKYTKTRRPVKVIHFEKFETRSEATKAEAAFKKLSRKNKDS
YLIEREEDSE
>Mature_89_residues
AKANEHFFYVLKCNDNSYYGGYTTDVTRREAEHNAGIRCKYTKTRRPVKVIHFEKFETRSEATKAEAAFKKLSRKNKDSY
LIEREEDSE

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y147_LISW6 (A0AEY3)

Other databases:

- EMBL:   AM263198
- RefSeq:   YP_848348.1
- ProteinModelPortal:   A0AEY3
- SMR:   A0AEY3
- STRING:   A0AEY3
- GeneID:   4466130
- GenomeReviews:   AM263198_GR
- KEGG:   lwe:lwe0147
- NMPDR:   fig|386043.6.peg.141
- eggNOG:   COG2827
- HOGENOM:   HBG678874
- OMA:   EGAKYTR
- ProtClustDB:   PRK00329
- BioCyc:   LWEL386043:LWE0147-MONOMER
- GO:   GO:0005622
- InterPro:   IPR000305

Pfam domain/function: PF01541 GIY-YIG; SSF82771 UvrC_N

EC number: NA

Molecular weight: Translated: 10648; Mature: 10517

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKANEHFFYVLKCNDNSYYGGYTTDVTRREAEHNAGIRCKYTKTRRPVKVIHFEKFETR
CCCCCCCEEEEEEECCCCEECCEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCC
SEATKAEAAFKKLSRKNKDSYLIEREEDSE
HHHHHHHHHHHHHHCCCCCCEEEECCCCCC
>Mature Secondary Structure 
AKANEHFFYVLKCNDNSYYGGYTTDVTRREAEHNAGIRCKYTKTRRPVKVIHFEKFETR
CCCCCCEEEEEEECCCCEECCEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCC
SEATKAEAAFKKLSRKNKDSYLIEREEDSE
HHHHHHHHHHHHHHCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA