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The map label for this gene is yabB [H]

Identifier: 116871566

GI number: 116871566

Start: 146917

End: 147669

Strand: Direct

Name: yabB [H]

Synonym: lwe0146

Alternate gene names: 116871566

Gene position: 146917-147669 (Clockwise)

Preceding gene: 116871565

Following gene: 116871567

Centisome position: 5.22

GC content: 39.04

Gene sequence:

>753_bases
TTGGAAAAACTCAAATTAATAGGCGATGAAAGACTCGATTACTTACTAGCAGAAAATTTGCGAATTATTCAAAGTCCATC
GGTATTTTCTTTCTCCATAGATGCAGTTCTCCTGGCGAAATTTAGTTATTTACCAATCCGTAAAGGTAAAATAATTGATT
TGTGTAGTGGAAATGGTATTATTCCTTTACTACTTAGTACACGAACAGAAGCGCAGATTGTTGGGGTTGAAATTCAAGAA
CGTCTTGCTGATATGGCCAAAAGAAGTGTTGCCTATAATCAACTGGAAGACCAAATTGAAATAATGGAATATGATTTAAA
TAAGATTACCGATTTGATTCCAAAGGAGCGAGCAGACATAGTTACGTGTAATCCGCCGTATTTCGCGACTCCAGCTACAA
GCTTGAAAAACGAAAATGAACATTATCGCATCGCCCGTCATGAAATTATGTGTACGCTAGAAGATACTATTCGAGTTGCG
GCTAGCCTTTTAAAACAAGGAGGCAAAGCAAATTTTGTCCATCGGCCAGAGCGCTTATTGGATATTATCGATTTAATGAG
AAAATACCGCTTAGAACCGAAACGTATCCAGCTTGTTCACCCACGAATCGACCGAGAAGCGAACACGGTTCTGGTAGAAG
GAATCAAAGACGGCAAGCCAGGTGTTAAGTATGTGCCGCCTGTTATTGTTTATGACGAGTTAGGCGAATATACACCAGTA
ATTAAGGAGATTTTATATGGCGAAAGCGAATGA

Upstream 100 bases:

>100_bases
TGAAGATTGTTTATTTTGCCTATCCTTGCTTAACAAAAAATAACATGACGGGCCTTTCTCGATTTAAGAGAAGGGCTTTT
TGCTAGAAAAGGTGAATTAT

Downstream 100 bases:

>100_bases
ACATTTCTTTTATGTACTAAAATGTAACGACAATTCTTATTATGGTGGCTATACGACTGATGTGACACGCCGAGAAGCCG
AACACAATGCTGGCATTAGG

Product: methyltransferase small domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MEKLKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTEAQIVGVEIQE
RLADMAKRSVAYNQLEDQIEIMEYDLNKITDLIPKERADIVTCNPPYFATPATSLKNENEHYRIARHEIMCTLEDTIRVA
ASLLKQGGKANFVHRPERLLDIIDLMRKYRLEPKRIQLVHPRIDREANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPV
IKEILYGESE

Sequences:

>Translated_250_residues
MEKLKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTEAQIVGVEIQE
RLADMAKRSVAYNQLEDQIEIMEYDLNKITDLIPKERADIVTCNPPYFATPATSLKNENEHYRIARHEIMCTLEDTIRVA
ASLLKQGGKANFVHRPERLLDIIDLMRKYRLEPKRIQLVHPRIDREANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPV
IKEILYGESE
>Mature_250_residues
MEKLKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTEAQIVGVEIQE
RLADMAKRSVAYNQLEDQIEIMEYDLNKITDLIPKERADIVTCNPPYFATPATSLKNENEHYRIARHEIMCTLEDTIRVA
ASLLKQGGKANFVHRPERLLDIIDLMRKYRLEPKRIQLVHPRIDREANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPV
IKEILYGESE

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 28520; Mature: 28520

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGI
CCCCHHCCHHHHHHHHHCCCEEEECCCEEEEEHHHHHHHHHHCCEECCCCEEEEECCCCE
IPLLLSTRTEAQIVGVEIQERLADMAKRSVAYNQLEDQIEIMEYDLNKITDLIPKERADI
EEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VTCNPPYFATPATSLKNENEHYRIARHEIMCTLEDTIRVAASLLKQGGKANFVHRPERLL
EECCCCCCCCCCHHHCCCCCCEEEEHHHEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHH
DIIDLMRKYRLEPKRIQLVHPRIDREANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPV
HHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEHHHCCHHHH
IKEILYGESE
HHHHHCCCCC
>Mature Secondary Structure
MEKLKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGI
CCCCHHCCHHHHHHHHHCCCEEEECCCEEEEEHHHHHHHHHHCCEECCCCEEEEECCCCE
IPLLLSTRTEAQIVGVEIQERLADMAKRSVAYNQLEDQIEIMEYDLNKITDLIPKERADI
EEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VTCNPPYFATPATSLKNENEHYRIARHEIMCTLEDTIRVAASLLKQGGKANFVHRPERLL
EECCCCCCCCCCHHHCCCCCCEEEEHHHEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHH
DIIDLMRKYRLEPKRIQLVHPRIDREANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPV
HHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEHHHCCHHHH
IKEILYGESE
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]