| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
Click here to switch to the map view.
The map label for this gene is 116871545
Identifier: 116871545
GI number: 116871545
Start: 125040
End: 125501
Strand: Direct
Name: 116871545
Synonym: lwe0125
Alternate gene names: NA
Gene position: 125040-125501 (Clockwise)
Preceding gene: 116871544
Following gene: 116871546
Centisome position: 4.44
GC content: 35.93
Gene sequence:
>462_bases ATGAAAAATGGTATAGTAGACGTAGAAGCAACGAACGCGTACAATGCCGCTGTGCTTAACGGAGAATTACCGCATGAAAG CAATGAAGCACAGGAAGAAGCCGAGTTGTTGCAGGCGGTAATTCAATCGGTGAAAGAAGGCATAGACCCGGTTACTGGAC AAGAGATAAGTAAAGCGCAAGGGTTTGGTATTATAAGTGGTCTTGTTTTCCGTTATACTGTTGGAGGTTATAAAGGGAAG AAGATTAAGATTCCTAAGAATATATTAGATAAAATAAAGGCAGCTAAGAAAATAAAGTATATTGAATCATTGTTAACACC AGCTCAAAAGAAGAGTATTAAAAGAATTGATAACAATATACAAAATCATTTAACAGATGGAGATTTTAGTGTAACTAAGA GAGATTTGGAAGGTAATCCTGTACCAAAAAAGGACAACCTGGAAAAAATTGGAATCATTTAG
Upstream 100 bases:
>100_bases CCTTTATATATTCTAAAGGTTCCCTCTGTTTTATTCAATACTTTTTGACATTTAAAGTTAACTCATTCCATTCATTCTGC ATATCGTGGCCGCGGGTGCT
Downstream 100 bases:
>100_bases ATGAAATGCTTAACACCTACCAATCGCTTAATAATTCTACGAAGAGTATTGAAAATTCTTTAACAAATCCTAATTTAGAT AAGAAAGTAAGAGTTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKNGIVDVEATNAYNAAVLNGELPHESNEAQEEAELLQAVIQSVKEGIDPVTGQEISKAQGFGIISGLVFRYTVGGYKGK KIKIPKNILDKIKAAKKIKYIESLLTPAQKKSIKRIDNNIQNHLTDGDFSVTKRDLEGNPVPKKDNLEKIGII
Sequences:
>Translated_153_residues MKNGIVDVEATNAYNAAVLNGELPHESNEAQEEAELLQAVIQSVKEGIDPVTGQEISKAQGFGIISGLVFRYTVGGYKGK KIKIPKNILDKIKAAKKIKYIESLLTPAQKKSIKRIDNNIQNHLTDGDFSVTKRDLEGNPVPKKDNLEKIGII >Mature_153_residues MKNGIVDVEATNAYNAAVLNGELPHESNEAQEEAELLQAVIQSVKEGIDPVTGQEISKAQGFGIISGLVFRYTVGGYKGK KIKIPKNILDKIKAAKKIKYIESLLTPAQKKSIKRIDNNIQNHLTDGDFSVTKRDLEGNPVPKKDNLEKIGII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16768; Mature: 16768
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNGIVDVEATNAYNAAVLNGELPHESNEAQEEAELLQAVIQSVKEGIDPVTGQEISKAQ CCCCCEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC GFGIISGLVFRYTVGGYKGKKIKIPKNILDKIKAAKKIKYIESLLTPAQKKSIKRIDNNI CCHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH QNHLTDGDFSVTKRDLEGNPVPKKDNLEKIGII HHHCCCCCCHHHHCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure MKNGIVDVEATNAYNAAVLNGELPHESNEAQEEAELLQAVIQSVKEGIDPVTGQEISKAQ CCCCCEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC GFGIISGLVFRYTVGGYKGKKIKIPKNILDKIKAAKKIKYIESLLTPAQKKSIKRIDNNI CCHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH QNHLTDGDFSVTKRDLEGNPVPKKDNLEKIGII HHHCCCCCCHHHHCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA