Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116871543

Identifier: 116871543

GI number: 116871543

Start: 124138

End: 124575

Strand: Direct

Name: 116871543

Synonym: lwe0123

Alternate gene names: NA

Gene position: 124138-124575 (Clockwise)

Preceding gene: 116871542

Following gene: 116871544

Centisome position: 4.41

GC content: 26.94

Gene sequence:

>438_bases
TTGAAAATAAAAAAAATATTACCACAAACAATAAAAAGTGAAATTTCTTTTATAGATGAAATTAAAAATTTTGATATTGT
AACTGAAAAAATGAATGACGATTTCTACACCTACAGATTAGGAAGTAACGTTATGATGTGGTTGAATGATGAAGGGGTAA
TCGGGGAGATAGAGTGCATTTTCCCTGCGCAAACAGATAATTTAATCACCTTATGGGAAGAAAAAAATACTGTAGTACAA
AATGGATTTCCGATGATTGATACTGATACTGTTGAGAACAAACCTTTTATTCCAAAAGTAAGAGTTTTTAACCATGGTGA
TTATTTTATACTATATTTCAGTAATATGTATAAATACGATAAAGAAATTATTTCTGAAAAACTTACTTTTTATATTAATG
ATACAGAATTAATTGCAATTAAAGCGGAATTAACTTGA

Upstream 100 bases:

>100_bases
ATGTAAATGAAAAAACTGGAACGTCTGTATTTGTTAACCCTGAAACAAATACAGTTGTTGGAATATGGCCTCAAAAATTT
AAATAGTAAGGAGTATAATT

Downstream 100 bases:

>100_bases
TGTTGAAAAATTATTATACAGGTTTCGAAGGATATCCAGAAATTGACTTTTATACTTATATAAATGGTGAAAAAACAGGT
ATAGAAATGTGGGAAGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKIKKILPQTIKSEISFIDEIKNFDIVTEKMNDDFYTYRLGSNVMMWLNDEGVIGEIECIFPAQTDNLITLWEEKNTVVQ
NGFPMIDTDTVENKPFIPKVRVFNHGDYFILYFSNMYKYDKEIISEKLTFYINDTELIAIKAELT

Sequences:

>Translated_145_residues
MKIKKILPQTIKSEISFIDEIKNFDIVTEKMNDDFYTYRLGSNVMMWLNDEGVIGEIECIFPAQTDNLITLWEEKNTVVQ
NGFPMIDTDTVENKPFIPKVRVFNHGDYFILYFSNMYKYDKEIISEKLTFYINDTELIAIKAELT
>Mature_145_residues
MKIKKILPQTIKSEISFIDEIKNFDIVTEKMNDDFYTYRLGSNVMMWLNDEGVIGEIECIFPAQTDNLITLWEEKNTVVQ
NGFPMIDTDTVENKPFIPKVRVFNHGDYFILYFSNMYKYDKEIISEKLTFYINDTELIAIKAELT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17088; Mature: 17088

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKKILPQTIKSEISFIDEIKNFDIVTEKMNDDFYTYRLGSNVMMWLNDEGVIGEIECI
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCEEEEECCCCCEEEEEEE
FPAQTDNLITLWEEKNTVVQNGFPMIDTDTVENKPFIPKVRVFNHGDYFILYFSNMYKYD
EECCCCCEEEEEECCCEEEECCCCEEECCCCCCCCCCCEEEEEECCCEEEEEECCHHHHH
KEIISEKLTFYINDTELIAIKAELT
HHHHCCEEEEEECCCEEEEEEEECC
>Mature Secondary Structure
MKIKKILPQTIKSEISFIDEIKNFDIVTEKMNDDFYTYRLGSNVMMWLNDEGVIGEIECI
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCEEEEECCCCCEEEEEEE
FPAQTDNLITLWEEKNTVVQNGFPMIDTDTVENKPFIPKVRVFNHGDYFILYFSNMYKYD
EECCCCCEEEEEECCCEEEECCCCEEECCCCCCCCCCCEEEEEECCCEEEEEECCHHHHH
KEIISEKLTFYINDTELIAIKAELT
HHHHCCEEEEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA