| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871542
Identifier: 116871542
GI number: 116871542
Start: 122819
End: 124123
Strand: Direct
Name: 116871542
Synonym: lwe0122
Alternate gene names: NA
Gene position: 122819-124123 (Clockwise)
Preceding gene: 116871541
Following gene: 116871543
Centisome position: 4.36
GC content: 37.16
Gene sequence:
>1305_bases GTGAGCCGAATTGACATCGGAGAAATACAAACCTTTGCGCACCAACTACATACAGCTAATGAAGCCGGAAGAAAAAGCAT TAAAGATATCAAAACCGCTGTGAAAAATTATACCGAAGACAGCAGTTTAAAAGGAAAAGCAGTTGATGCATCGAAAAATT ACTACCAAATGACCTATTTCCCATTATGTGATGCGATAATCGAAGCAATGAACGAAAGCGAAGAACGATTAGCGAAATAT ATAGCCGATTTTCACGCCCAAGTGGATGGTTCAGCTGATGCGAGAATTGATGCGGACGGTTTATACGAACTCGGGAAAAT GATTGATCTCATCGAAGCGAAAAAAGAAGCACTAGCACAGCGAATGAATACTGGAACAGAGGGGCAAATGCAGAGCTATC GTTCCCAGCTGAGTATTGCCTACAAACAAGAAAATATCTTAGAAAAATACTTGGCTTTTGAACAGAGTCATAGCGGCTTT TTTGATAATTTAACCGATTTAGTCCAAGGAATTCAACAGACTATTCGCGAACTCCAGTCGAACATTCAATTTAACAGTAA AACGGGCACCTATGATATGAGCAAACTGAATTTCACCACGGTAACTCGGATGCAAAACGCCTTAGGAAAAGCGCTAAAAG ATAACCAAACAACATTCAATTTTGACGAATATCAAAAAACGTACCGTGGTCAAATGTGGGTGTTAATGAAAAATGGTATA GTAGATGTAGAAGCAACGAACGCGTATAATGCCGCTGTGCTAAACGGGGAATTACCACATGATGGGAATGCCCCAGAACA AGATGCGGAACAATTAAAGGCAGTGCTAGAATCACTGAAAAACAAAAAAGACCCTATTACTGGAGTAGATATAAGTAGCG CACACGTTATATCTATTTTGAGTGGACTAGTATTTACCTATACTGCTGGTATCTATAAAGGAAAGAAAATCAGTATTTCT AATCACGATTTATGGAAAATTAGAAACAAAAACGGCACTCAAAAAGTAATATATAGTGCCAATGGTAAACCTTATCTAAG AGCATTAAGAAGAACTCAATTTGATGAAATTTTAAAAAACGGTTTCCCTGATGGAACAAAGTTCAATCAACATGCTTATA ATTCACTTTTCAAATCTGGTAGAAAAGATATTATGCCTGATGATATCATTGAAGCACTAAGTAATAAACCAGTGCCATCA GAACCTGGAAGCGTAAAATATGTAAATGAAAAAACTGGAACGTCTGTATTTGTTAACCCTGAAACAAATACAGTTGTTGG AATATGGCCTCAAAAATTTAAATAG
Upstream 100 bases:
>100_bases AAGCGAACCAAGAAGAACACCAAAAAAACATCATCGCTTGCCAAAAAAACATCTACCAATTAGAAACTCAACAACAAGAC TTACAAAAGGAGTTGTTACA
Downstream 100 bases:
>100_bases TAAGGAGTATAATTTTGAAAATAAAAAAAATATTACCACAAACAATAAAAAGTGAAATTTCTTTTATAGATGAAATTAAA AATTTTGATATTGTAACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MSRIDIGEIQTFAHQLHTANEAGRKSIKDIKTAVKNYTEDSSLKGKAVDASKNYYQMTYFPLCDAIIEAMNESEERLAKY IADFHAQVDGSADARIDADGLYELGKMIDLIEAKKEALAQRMNTGTEGQMQSYRSQLSIAYKQENILEKYLAFEQSHSGF FDNLTDLVQGIQQTIRELQSNIQFNSKTGTYDMSKLNFTTVTRMQNALGKALKDNQTTFNFDEYQKTYRGQMWVLMKNGI VDVEATNAYNAAVLNGELPHDGNAPEQDAEQLKAVLESLKNKKDPITGVDISSAHVISILSGLVFTYTAGIYKGKKISIS NHDLWKIRNKNGTQKVIYSANGKPYLRALRRTQFDEILKNGFPDGTKFNQHAYNSLFKSGRKDIMPDDIIEALSNKPVPS EPGSVKYVNEKTGTSVFVNPETNTVVGIWPQKFK
Sequences:
>Translated_434_residues MSRIDIGEIQTFAHQLHTANEAGRKSIKDIKTAVKNYTEDSSLKGKAVDASKNYYQMTYFPLCDAIIEAMNESEERLAKY IADFHAQVDGSADARIDADGLYELGKMIDLIEAKKEALAQRMNTGTEGQMQSYRSQLSIAYKQENILEKYLAFEQSHSGF FDNLTDLVQGIQQTIRELQSNIQFNSKTGTYDMSKLNFTTVTRMQNALGKALKDNQTTFNFDEYQKTYRGQMWVLMKNGI VDVEATNAYNAAVLNGELPHDGNAPEQDAEQLKAVLESLKNKKDPITGVDISSAHVISILSGLVFTYTAGIYKGKKISIS NHDLWKIRNKNGTQKVIYSANGKPYLRALRRTQFDEILKNGFPDGTKFNQHAYNSLFKSGRKDIMPDDIIEALSNKPVPS EPGSVKYVNEKTGTSVFVNPETNTVVGIWPQKFK >Mature_433_residues SRIDIGEIQTFAHQLHTANEAGRKSIKDIKTAVKNYTEDSSLKGKAVDASKNYYQMTYFPLCDAIIEAMNESEERLAKYI ADFHAQVDGSADARIDADGLYELGKMIDLIEAKKEALAQRMNTGTEGQMQSYRSQLSIAYKQENILEKYLAFEQSHSGFF DNLTDLVQGIQQTIRELQSNIQFNSKTGTYDMSKLNFTTVTRMQNALGKALKDNQTTFNFDEYQKTYRGQMWVLMKNGIV DVEATNAYNAAVLNGELPHDGNAPEQDAEQLKAVLESLKNKKDPITGVDISSAHVISILSGLVFTYTAGIYKGKKISISN HDLWKIRNKNGTQKVIYSANGKPYLRALRRTQFDEILKNGFPDGTKFNQHAYNSLFKSGRKDIMPDDIIEALSNKPVPSE PGSVKYVNEKTGTSVFVNPETNTVVGIWPQKFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48732; Mature: 48601
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIDIGEIQTFAHQLHTANEAGRKSIKDIKTAVKNYTEDSSLKGKAVDASKNYYQMTYF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEHHH PLCDAIIEAMNESEERLAKYIADFHAQVDGSADARIDADGLYELGKMIDLIEAKKEALAQ HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHH RMNTGTEGQMQSYRSQLSIAYKQENILEKYLAFEQSHSGFFDNLTDLVQGIQQTIRELQS HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH NIQFNSKTGTYDMSKLNFTTVTRMQNALGKALKDNQTTFNFDEYQKTYRGQMWVLMKNGI CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCE VDVEATNAYNAAVLNGELPHDGNAPEQDAEQLKAVLESLKNKKDPITGVDISSAHVISIL EEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH SGLVFTYTAGIYKGKKISISNHDLWKIRNKNGTQKVIYSANGKPYLRALRRTQFDEILKN HHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC GFPDGTKFNQHAYNSLFKSGRKDIMPDDIIEALSNKPVPSEPGSVKYVNEKTGTSVFVNP CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEECC ETNTVVGIWPQKFK CCCEEEEECCCCCC >Mature Secondary Structure SRIDIGEIQTFAHQLHTANEAGRKSIKDIKTAVKNYTEDSSLKGKAVDASKNYYQMTYF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEHHH PLCDAIIEAMNESEERLAKYIADFHAQVDGSADARIDADGLYELGKMIDLIEAKKEALAQ HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHH RMNTGTEGQMQSYRSQLSIAYKQENILEKYLAFEQSHSGFFDNLTDLVQGIQQTIRELQS HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH NIQFNSKTGTYDMSKLNFTTVTRMQNALGKALKDNQTTFNFDEYQKTYRGQMWVLMKNGI CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCE VDVEATNAYNAAVLNGELPHDGNAPEQDAEQLKAVLESLKNKKDPITGVDISSAHVISIL EEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH SGLVFTYTAGIYKGKKISISNHDLWKIRNKNGTQKVIYSANGKPYLRALRRTQFDEILKN HHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC GFPDGTKFNQHAYNSLFKSGRKDIMPDDIIEALSNKPVPSEPGSVKYVNEKTGTSVFVNP CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEECC ETNTVVGIWPQKFK CCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA