| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871525
Identifier: 116871525
GI number: 116871525
Start: 108345
End: 109418
Strand: Direct
Name: 116871525
Synonym: lwe0105
Alternate gene names: NA
Gene position: 108345-109418 (Clockwise)
Preceding gene: 116871524
Following gene: 116871528
Centisome position: 3.85
GC content: 31.1
Gene sequence:
>1074_bases ATGAGTAAGGAACCAAATGATGAATTAGAAGACTTGTTTGATATAGAAAAAATGAGCAAAGAAGTAAAAAAAGTAAAGCG TCGTAGCATTTCTAAAACATCAGTAATCATTATCGGGATTGTATTACTTATTCTTGCTGGGGTACTTGGTTATTTATATA TTTCTAACAAAGTAGCTTCGGATAAAGCAAGAAAACAAGCAGAAAATCATGTAGCTTTCGTAACAACTATCAATGAATTC TATAAATATCCGAATACCATTCTTCAGACATCTACAGAAATAAGTGATAATAATCGTAAAGTGGAGATATCAGAGGTGAA TTTCAAATTATTAAAAGATAGATTTATTCCGTTTACTACAGCAACTATGAGTTTAGATTCAGATGGTATAGGCTCAGGCT ATCCTACAATAGAAATTAATTTAGAAGAGAAAGAAAAAGACGGGGAGAAATATAAAGTTGGTATTAATGATTTAACAACT GGAAATAGATTAGCTGATTATTACCATCCTTTGAAAAAATATTCTTCTATGAAACAAGATTTGAAAAAATTAAGCGAATT TCCTAAAAACACCTATTTAGAGATGGCTATCTCTTTTGATAAAGCTTATTCCTCTCTAGAAGTGGAAAAAATGTTACCCA ATAATTTAAAACCAACGTTCTTTTGGTTAGATGGTTATGATCTTTCTATTGATGACATGCCTTCACCCCTTAATGAACAA TTATATGGTTATGATAATCCCAATACTAATTTAGAGAATAAATTCTGGACAAATCCAATAGAAGACGAACAAGATTATAT CAAACAAATGAAGTTGAGCAACTTTACTTTCTATTCTAATGGAAGTATTTCACAAGATGGTACAGTATATGGTTCTGGTA AAAGCGTTTATAAGGTTTTAAAAACTAAATCCGATAAAGGAGAAAAGTTGGTTATCGGAATTTCCATCGTTGCCACTAAA GAAGAATTACAGCAATTAGCCAATGTAAATTATATCCGAGCATCAAGTGTAGGCGTAATTTCAAACGCAGTAGATGCAGC AAACTACTACGAACAAACTGGGGAAATCAATTGA
Upstream 100 bases:
>100_bases TATCAGGAAATTGCAGAGTATTTGGATACAACTCCATCTAACGTGAAGACCTATTTATCAAGAGCTAGAAGTGCCTTTAA GAAAATCTGGGGGGATTTTA
Downstream 100 bases:
>100_bases AAAAGGACACTCTGGATTTTCAGAGTGTCCATTTAAAATTTTTTATACACATCGATAGAGTTGCCAAAATTGATTAGATA ATCCCCGCAATCATACATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSKEPNDELEDLFDIEKMSKEVKKVKRRSISKTSVIIIGIVLLILAGVLGYLYISNKVASDKARKQAENHVAFVTTINEF YKYPNTILQTSTEISDNNRKVEISEVNFKLLKDRFIPFTTATMSLDSDGIGSGYPTIEINLEEKEKDGEKYKVGINDLTT GNRLADYYHPLKKYSSMKQDLKKLSEFPKNTYLEMAISFDKAYSSLEVEKMLPNNLKPTFFWLDGYDLSIDDMPSPLNEQ LYGYDNPNTNLENKFWTNPIEDEQDYIKQMKLSNFTFYSNGSISQDGTVYGSGKSVYKVLKTKSDKGEKLVIGISIVATK EELQQLANVNYIRASSVGVISNAVDAANYYEQTGEIN
Sequences:
>Translated_357_residues MSKEPNDELEDLFDIEKMSKEVKKVKRRSISKTSVIIIGIVLLILAGVLGYLYISNKVASDKARKQAENHVAFVTTINEF YKYPNTILQTSTEISDNNRKVEISEVNFKLLKDRFIPFTTATMSLDSDGIGSGYPTIEINLEEKEKDGEKYKVGINDLTT GNRLADYYHPLKKYSSMKQDLKKLSEFPKNTYLEMAISFDKAYSSLEVEKMLPNNLKPTFFWLDGYDLSIDDMPSPLNEQ LYGYDNPNTNLENKFWTNPIEDEQDYIKQMKLSNFTFYSNGSISQDGTVYGSGKSVYKVLKTKSDKGEKLVIGISIVATK EELQQLANVNYIRASSVGVISNAVDAANYYEQTGEIN >Mature_356_residues SKEPNDELEDLFDIEKMSKEVKKVKRRSISKTSVIIIGIVLLILAGVLGYLYISNKVASDKARKQAENHVAFVTTINEFY KYPNTILQTSTEISDNNRKVEISEVNFKLLKDRFIPFTTATMSLDSDGIGSGYPTIEINLEEKEKDGEKYKVGINDLTTG NRLADYYHPLKKYSSMKQDLKKLSEFPKNTYLEMAISFDKAYSSLEVEKMLPNNLKPTFFWLDGYDLSIDDMPSPLNEQL YGYDNPNTNLENKFWTNPIEDEQDYIKQMKLSNFTFYSNGSISQDGTVYGSGKSVYKVLKTKSDKGEKLVIGISIVATKE ELQQLANVNYIRASSVGVISNAVDAANYYEQTGEIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40498; Mature: 40367
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKEPNDELEDLFDIEKMSKEVKKVKRRSISKTSVIIIGIVLLILAGVLGYLYISNKVAS CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH DKARKQAENHVAFVTTINEFYKYPNTILQTSTEISDNNRKVEISEVNFKLLKDRFIPFTT HHHHHHHHCCEEEEEEHHHHHHCCHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCCEEE ATMSLDSDGIGSGYPTIEINLEEKEKDGEKYKVGINDLTTGNRLADYYHPLKKYSSMKQD EEEEECCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH LKKLSEFPKNTYLEMAISFDKAYSSLEVEKMLPNNLKPTFFWLDGYDLSIDDMPSPLNEQ HHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCEECCCCCCCCCHHHC LYGYDNPNTNLENKFWTNPIEDEQDYIKQMKLSNFTFYSNGSISQDGTVYGSGKSVYKVL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCEEEECCHHHHHHH KTKSDKGEKLVIGISIVATKEELQQLANVNYIRASSVGVISNAVDAANYYEQTGEIN HCCCCCCCEEEEEEEEEECHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKEPNDELEDLFDIEKMSKEVKKVKRRSISKTSVIIIGIVLLILAGVLGYLYISNKVAS CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH DKARKQAENHVAFVTTINEFYKYPNTILQTSTEISDNNRKVEISEVNFKLLKDRFIPFTT HHHHHHHHCCEEEEEEHHHHHHCCHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCCEEE ATMSLDSDGIGSGYPTIEINLEEKEKDGEKYKVGINDLTTGNRLADYYHPLKKYSSMKQD EEEEECCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH LKKLSEFPKNTYLEMAISFDKAYSSLEVEKMLPNNLKPTFFWLDGYDLSIDDMPSPLNEQ HHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCEECCCCCCCCCHHHC LYGYDNPNTNLENKFWTNPIEDEQDYIKQMKLSNFTFYSNGSISQDGTVYGSGKSVYKVL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCEEEECCHHHHHHH KTKSDKGEKLVIGISIVATKEELQQLANVNYIRASSVGVISNAVDAANYYEQTGEIN HCCCCCCCEEEEEEEEEECHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA