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The map label for this gene is ycfX [C]

Identifier: 116871516

GI number: 116871516

Start: 97966

End: 98853

Strand: Direct

Name: ycfX [C]

Synonym: lwe0094

Alternate gene names: 116871516

Gene position: 97966-98853 (Clockwise)

Preceding gene: 116871515

Following gene: 116871517

Centisome position: 3.48

GC content: 37.61

Gene sequence:

>888_bases
ATGTATTTTGTATACGATATTGGCGGAACTTTTATTAAATTTGCTTTGATGGAAAATAATGGTGCTATAAAAATGAAAGA
TAAATTCCCTACAACAGCTAAAAGTGCTGATGAATTAGTGGCGCAAATGGTAGAAAAATTTAAACCTTTTCAACAAAAAG
TGAAAGGTATTGCTGTAAGCTGTCCAGGAGTTGTCGATTCTGAAAAAGGCGTTATTTATCATGGTGGTTCGTTATTATTT
ATGCATGAAAAAAATCTTGCTGAAATGCTTGCACGCGAATGTCATGTGCCTGTTGTTATACAAAATGATGCCAAAAGTGC
TGCCCTTGCAGAACTTTGGTTAGGTGTGGCGAAAGATGTACAAAGTGCGGCTATTTTAACCCTAGGAAGTGGCGTTGGTG
GTGGAATTATTATCGACGGCAAATTGCAATCTGGTTTTCATTTGATGGCTGGAGAGGTGAGTTATATGGAGACAACTTTT
GATACTCAGAAACTGCGGGGAAACTTTTTTGGACGGACGGGGTCTGCGGTTGAGTTAATTAAGAGAATTGCTACTGAAAA
AAATTTGATTAATAAAAAAGACGGCGAACGTGTTTTTGAACTTATTAACCAAGGTGATGAGGTCGCAAGCCAAATATTCG
ATGATTATATTTTTGGTTTAGCTTCACAAATTTTAAATATCCAATACTTGATTGATCCCGAAATTGTGGCGATTGGTGGT
GGAATTAGTGCGCAACCGATTGTTGTCGAGCGACTCAATTCAGCTGTTCAAGCTATTAAATCTGCGAATCCGTTCCATGC
AGCCCAACCGAAAATCGTTACTTGTCGTTTCCAAAATGATGCGAACTTATACGGAGCATTGTATAATTTTTTCTTGCAGT
TCAATTAA

Upstream 100 bases:

>100_bases
TTGAGGTTATAATTTGAAGGGAAAATAGTCGCTAAATAGAGGACAAAATGACAACTTGCGTATTACAATGAATAAAAGAG
ACTTGAAAGGGAGTAGGCAA

Downstream 100 bases:

>100_bases
AGGAGAACTGCAAATGGAATTTACATATGAAATTATTGAAATAGATGCAAAGATGCCTGTAAAATATATAATTCATAATA
TGCCAGATGCGATTGCGGTG

Product: ROK family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MYFVYDIGGTFIKFALMENNGAIKMKDKFPTTAKSADELVAQMVEKFKPFQQKVKGIAVSCPGVVDSEKGVIYHGGSLLF
MHEKNLAEMLARECHVPVVIQNDAKSAALAELWLGVAKDVQSAAILTLGSGVGGGIIIDGKLQSGFHLMAGEVSYMETTF
DTQKLRGNFFGRTGSAVELIKRIATEKNLINKKDGERVFELINQGDEVASQIFDDYIFGLASQILNIQYLIDPEIVAIGG
GISAQPIVVERLNSAVQAIKSANPFHAAQPKIVTCRFQNDANLYGALYNFFLQFN

Sequences:

>Translated_295_residues
MYFVYDIGGTFIKFALMENNGAIKMKDKFPTTAKSADELVAQMVEKFKPFQQKVKGIAVSCPGVVDSEKGVIYHGGSLLF
MHEKNLAEMLARECHVPVVIQNDAKSAALAELWLGVAKDVQSAAILTLGSGVGGGIIIDGKLQSGFHLMAGEVSYMETTF
DTQKLRGNFFGRTGSAVELIKRIATEKNLINKKDGERVFELINQGDEVASQIFDDYIFGLASQILNIQYLIDPEIVAIGG
GISAQPIVVERLNSAVQAIKSANPFHAAQPKIVTCRFQNDANLYGALYNFFLQFN
>Mature_295_residues
MYFVYDIGGTFIKFALMENNGAIKMKDKFPTTAKSADELVAQMVEKFKPFQQKVKGIAVSCPGVVDSEKGVIYHGGSLLF
MHEKNLAEMLARECHVPVVIQNDAKSAALAELWLGVAKDVQSAAILTLGSGVGGGIIIDGKLQSGFHLMAGEVSYMETTF
DTQKLRGNFFGRTGSAVELIKRIATEKNLINKKDGERVFELINQGDEVASQIFDDYIFGLASQILNIQYLIDPEIVAIGG
GISAQPIVVERLNSAVQAIKSANPFHAAQPKIVTCRFQNDANLYGALYNFFLQFN

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1787363, Length=311, Percent_Identity=27.3311897106109, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI87081733, Length=283, Percent_Identity=24.0282685512367, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787878, Length=145, Percent_Identity=27.5862068965517, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI87082230, Length=253, Percent_Identity=27.2727272727273, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1786891, Length=268, Percent_Identity=21.2686567164179, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 32225; Mature: 32225

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFVYDIGGTFIKFALMENNGAIKMKDKFPTTAKSADELVAQMVEKFKPFQQKVKGIAVS
CEEEEECCCCEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHCCEEEE
CPGVVDSEKGVIYHGGSLLFMHEKNLAEMLARECHVPVVIQNDAKSAALAELWLGVAKDV
CCCCCCCCCCEEEECCEEEEEECCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHH
QSAAILTLGSGVGGGIIIDGKLQSGFHLMAGEVSYMETTFDTQKLRGNFFGRTGSAVELI
HHEEEEEECCCCCCCEEEECCCCCCEEEEECCHHHHHHHCCHHHHCCCCCCCCCHHHHHH
KRIATEKNLINKKDGERVFELINQGDEVASQIFDDYIFGLASQILNIQYLIDPEIVAIGG
HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEEECC
GISAQPIVVERLNSAVQAIKSANPFHAAQPKIVTCRFQNDANLYGALYNFFLQFN
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHEECC
>Mature Secondary Structure
MYFVYDIGGTFIKFALMENNGAIKMKDKFPTTAKSADELVAQMVEKFKPFQQKVKGIAVS
CEEEEECCCCEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHCCEEEE
CPGVVDSEKGVIYHGGSLLFMHEKNLAEMLARECHVPVVIQNDAKSAALAELWLGVAKDV
CCCCCCCCCCEEEECCEEEEEECCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHH
QSAAILTLGSGVGGGIIIDGKLQSGFHLMAGEVSYMETTFDTQKLRGNFFGRTGSAVELI
HHEEEEEECCCCCCCEEEECCCCCCEEEEECCHHHHHHHCCHHHHCCCCCCCCCHHHHHH
KRIATEKNLINKKDGERVFELINQGDEVASQIFDDYIFGLASQILNIQYLIDPEIVAIGG
HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEEECC
GISAQPIVVERLNSAVQAIKSANPFHAAQPKIVTCRFQNDANLYGALYNFFLQFN
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842; 8177218 [H]