| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
Click here to switch to the map view.
The map label for this gene is 116871503
Identifier: 116871503
GI number: 116871503
Start: 86533
End: 87165
Strand: Direct
Name: 116871503
Synonym: lwe0081
Alternate gene names: NA
Gene position: 86533-87165 (Clockwise)
Preceding gene: 116871502
Following gene: 116871504
Centisome position: 3.07
GC content: 30.33
Gene sequence:
>633_bases ATGACTTTTTTAGAGCTCCATCAATTTATCAAACAAGATTTATTGATTTATTCATGGATTTTAAACAACTTCTGTCTCAC TCAACATAAATTAGAAGTGGGTATGGAGCTAGTTATGAATAACGAACAAGTAATTATTATGGAAAAAGGATTATTGGCAC AAGAAAGTATTGAAAGCAAAACCATTATTCACCGTATTTTCGAAGACCAAAGAATCATTTTTAATACAGAAGGAAATCTA TCGTTAACTGCACTAGAAGATACGACTTATAGAATAGTTGATAAAAAAGATTTGCTTGATGAATTAGATAGTCAAAAATT ATTGCCACATTTTCTATTGCAAATAGCAGAAGATTTTGAGCAAGATTTAGAACAAGAAAGAAAATTGATGTCAGCAAATT CAGAAGAACGAATAGAATTAATTTTAACAAAAATTATTGATCGACATCAGTTAGATTCAGTGACCAACCCAACATTTCCA AAATGGTTAAAAATATATGTGCTCGCAAGATTAGCAAAATGTTCTGTATCAACAACTTCTATTGTAGTAAATGAATTAGC GCAAAAAGGAGTTATTAATGTCAAAACAACTCCATGGCAATTGGTTGAGAATTCGCAAATTTCGTGTGCCTAG
Upstream 100 bases:
>100_bases AGGAAATTTTCATTATATTTTCATAATCAAGTTCTATACTTAAGTTAAATTCTTAATCAACCTATTGATATAACAAAATT GGATGAAGGGAAGTAAGGAA
Downstream 100 bases:
>100_bases TGAATTTAGAAACTATGCTAATAAAAAACATTTTCACATATGAAGTTATAAATAGTGTAAAAAAACTACTTAAAAATAAA TTTAAGTAGTTTTTTTTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTFLELHQFIKQDLLIYSWILNNFCLTQHKLEVGMELVMNNEQVIIMEKGLLAQESIESKTIIHRIFEDQRIIFNTEGNL SLTALEDTTYRIVDKKDLLDELDSQKLLPHFLLQIAEDFEQDLEQERKLMSANSEERIELILTKIIDRHQLDSVTNPTFP KWLKIYVLARLAKCSVSTTSIVVNELAQKGVINVKTTPWQLVENSQISCA
Sequences:
>Translated_210_residues MTFLELHQFIKQDLLIYSWILNNFCLTQHKLEVGMELVMNNEQVIIMEKGLLAQESIESKTIIHRIFEDQRIIFNTEGNL SLTALEDTTYRIVDKKDLLDELDSQKLLPHFLLQIAEDFEQDLEQERKLMSANSEERIELILTKIIDRHQLDSVTNPTFP KWLKIYVLARLAKCSVSTTSIVVNELAQKGVINVKTTPWQLVENSQISCA >Mature_209_residues TFLELHQFIKQDLLIYSWILNNFCLTQHKLEVGMELVMNNEQVIIMEKGLLAQESIESKTIIHRIFEDQRIIFNTEGNLS LTALEDTTYRIVDKKDLLDELDSQKLLPHFLLQIAEDFEQDLEQERKLMSANSEERIELILTKIIDRHQLDSVTNPTFPK WLKIYVLARLAKCSVSTTSIVVNELAQKGVINVKTTPWQLVENSQISCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24374; Mature: 24242
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLELHQFIKQDLLIYSWILNNFCLTQHKLEVGMELVMNNEQVIIMEKGLLAQESIESK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCHHHHHHHHH TIIHRIFEDQRIIFNTEGNLSLTALEDTTYRIVDKKDLLDELDSQKLLPHFLLQIAEDFE HHHHHHHCCCEEEEECCCCEEEEEECCCEEEEECHHHHHHHHCHHHHHHHHHHHHHHHHH QDLEQERKLMSANSEERIELILTKIIDRHQLDSVTNPTFPKWLKIYVLARLAKCSVSTTS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHH IVVNELAQKGVINVKTTPWQLVENSQISCA HHHHHHHHCCEEEECCCCHHHHCCCCCCCC >Mature Secondary Structure TFLELHQFIKQDLLIYSWILNNFCLTQHKLEVGMELVMNNEQVIIMEKGLLAQESIESK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCHHHHHHHHH TIIHRIFEDQRIIFNTEGNLSLTALEDTTYRIVDKKDLLDELDSQKLLPHFLLQIAEDFE HHHHHHHCCCEEEEECCCCEEEEEECCCEEEEECHHHHHHHHCHHHHHHHHHHHHHHHHH QDLEQERKLMSANSEERIELILTKIIDRHQLDSVTNPTFPKWLKIYVLARLAKCSVSTTS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHH IVVNELAQKGVINVKTTPWQLVENSQISCA HHHHHHHHCCEEEECCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA