Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116871488

Identifier: 116871488

GI number: 116871488

Start: 66449

End: 67546

Strand: Direct

Name: 116871488

Synonym: lwe0066

Alternate gene names: NA

Gene position: 66449-67546 (Clockwise)

Preceding gene: 116871487

Following gene: 116871489

Centisome position: 2.36

GC content: 32.97

Gene sequence:

>1098_bases
ATGAAAAAAGTAATCTTTTTATTAATTATATGTAGTTGCATAGTTGTCGGATGTGCTTCGGAGGACTTCAAAGTGTATAG
GACTAAATCTTTCCAGTACGGAGAAACAGTAGAGATAGAGGAAGGCGACAAGTTACAATTATTTAAAGATAGTCTTTATT
TAATTCCAGAAGTTACATTTCCAGATAATGATTTGAAGGGACAGGTTGAGTTTAGAAAAATCGGCTCAAATTTGCTATCG
GAGAAAAGCACCTTATTAGAATTAACCAACTTGGAAGACTCTATAGTTGATTTAACTCCCTTCTCATATAATTCTAATCC
CTCTGGAGAGCTATCTGTATTTAATTTTAACAAGCAAGTAGGCATTATTGAAAGCACAGAAAAATATATTCCAATCTCCC
CAAAGATGAAACAAGAAAAAGGCGATTATATAGGAACGGGAACCTTTACTAATGGTGAAAATGTCATTATGTTTTTTGAG
GAAACTAATGGAATATACACACTCACTTGCTGGGATAAGCAGGGGAAAATCAACAAAGAAGGTACGTTAACAGCGATTAC
GAAAGAAAAGAACCTTTCTGTAGAAAGTATGGCTGTTTTTGAGGATAAGATCTATGTTTATTCCTATAAAAGTAATAAAG
TCTATGTTATTTCGCAGGATTTAAAACTGCTCCATGCGTGGAATATCGAAGGGGAAATGAGAAAGGTTGTTCCTGAAAAA
TGGGGCAGTTCTGTAAAGTTTGTCCTCCAAAGAGAGTTAAATGAACTATTTATTTATAATTATGTTCAACCTGAACAAGG
TATATACCAACTAACAAAAACCGGATTAGAGAAGTTAGAATATGGTCAAGAAAAATATAAGGATATGTATTTATATGCTA
ATGAGGGTTTTTATAGTCTACATGAGAAACAAGTCATTCGAACTGATACCGAAGATATTTATCAGGGAGTATTAATGAAA
AACGGTGACTACTATTTCATTACATCCAAAGATTTCAGCCATCCTCAAAAAGAGTCAGAAGAAGGAAAAGTCTATTTAAA
TAAAGTAAGTAAAAAGAAATTACCATCCTTCCTTGATTCACTTAAATCAAAGGAATGA

Upstream 100 bases:

>100_bases
ATTATTTTAAAATAGAACGACAACAAATTTCAAAAGTATTTTAAGGTGATAAAAATACGCAAATAAGTTCAACTATGAAC
AAAACAGAGGTGAATCTAGT

Downstream 100 bases:

>100_bases
CTGTAGAAGATTTTATTTTTATCGAATAGCTACAATCGTTAAAATTGTTTCTGAAAGATTCTAAAGTCATTAAGAATAAA
GTTAAGATGTTGAAAACACA

Product: putative secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MKKVIFLLIICSCIVVGCASEDFKVYRTKSFQYGETVEIEEGDKLQLFKDSLYLIPEVTFPDNDLKGQVEFRKIGSNLLS
EKSTLLELTNLEDSIVDLTPFSYNSNPSGELSVFNFNKQVGIIESTEKYIPISPKMKQEKGDYIGTGTFTNGENVIMFFE
ETNGIYTLTCWDKQGKINKEGTLTAITKEKNLSVESMAVFEDKIYVYSYKSNKVYVISQDLKLLHAWNIEGEMRKVVPEK
WGSSVKFVLQRELNELFIYNYVQPEQGIYQLTKTGLEKLEYGQEKYKDMYLYANEGFYSLHEKQVIRTDTEDIYQGVLMK
NGDYYFITSKDFSHPQKESEEGKVYLNKVSKKKLPSFLDSLKSKE

Sequences:

>Translated_365_residues
MKKVIFLLIICSCIVVGCASEDFKVYRTKSFQYGETVEIEEGDKLQLFKDSLYLIPEVTFPDNDLKGQVEFRKIGSNLLS
EKSTLLELTNLEDSIVDLTPFSYNSNPSGELSVFNFNKQVGIIESTEKYIPISPKMKQEKGDYIGTGTFTNGENVIMFFE
ETNGIYTLTCWDKQGKINKEGTLTAITKEKNLSVESMAVFEDKIYVYSYKSNKVYVISQDLKLLHAWNIEGEMRKVVPEK
WGSSVKFVLQRELNELFIYNYVQPEQGIYQLTKTGLEKLEYGQEKYKDMYLYANEGFYSLHEKQVIRTDTEDIYQGVLMK
NGDYYFITSKDFSHPQKESEEGKVYLNKVSKKKLPSFLDSLKSKE
>Mature_365_residues
MKKVIFLLIICSCIVVGCASEDFKVYRTKSFQYGETVEIEEGDKLQLFKDSLYLIPEVTFPDNDLKGQVEFRKIGSNLLS
EKSTLLELTNLEDSIVDLTPFSYNSNPSGELSVFNFNKQVGIIESTEKYIPISPKMKQEKGDYIGTGTFTNGENVIMFFE
ETNGIYTLTCWDKQGKINKEGTLTAITKEKNLSVESMAVFEDKIYVYSYKSNKVYVISQDLKLLHAWNIEGEMRKVVPEK
WGSSVKFVLQRELNELFIYNYVQPEQGIYQLTKTGLEKLEYGQEKYKDMYLYANEGFYSLHEKQVIRTDTEDIYQGVLMK
NGDYYFITSKDFSHPQKESEEGKVYLNKVSKKKLPSFLDSLKSKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42171; Mature: 42171

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVIFLLIICSCIVVGCASEDFKVYRTKSFQYGETVEIEEGDKLQLFKDSLYLIPEVTF
CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEECCEEEEEEEEC
PDNDLKGQVEFRKIGSNLLSEKSTLLELTNLEDSIVDLTPFSYNSNPSGELSVFNFNKQV
CCCCCCCCCHHHHHHHHHHHCCHHEEEEECCCCCEEEECCCCCCCCCCCCEEEEEECCEE
GIIESTEKYIPISPKMKQEKGDYIGTGTFTNGENVIMFFEETNGIYTLTCWDKQGKINKE
EEEECCCCEECCCCCCHHCCCCEEECCEEECCCEEEEEEECCCCEEEEEEECCCCCCCCC
GTLTAITKEKNLSVESMAVFEDKIYVYSYKSNKVYVISQDLKLLHAWNIEGEMRKVVPEK
CCEEEEEECCCCCHHHEEEEECEEEEEEECCCEEEEEECCCEEEEEECCCCHHHHHCHHH
WGSSVKFVLQRELNELFIYNYVQPEQGIYQLTKTGLEKLEYGQEKYKDMYLYANEGFYSL
HCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHCCEEEEEECCCEEEC
HEKQVIRTDTEDIYQGVLMKNGDYYFITSKDFSHPQKESEEGKVYLNKVSKKKLPSFLDS
CCCHHEECCHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH
LKSKE
HHCCC
>Mature Secondary Structure
MKKVIFLLIICSCIVVGCASEDFKVYRTKSFQYGETVEIEEGDKLQLFKDSLYLIPEVTF
CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEECCEEEEEEEEC
PDNDLKGQVEFRKIGSNLLSEKSTLLELTNLEDSIVDLTPFSYNSNPSGELSVFNFNKQV
CCCCCCCCCHHHHHHHHHHHCCHHEEEEECCCCCEEEECCCCCCCCCCCCEEEEEECCEE
GIIESTEKYIPISPKMKQEKGDYIGTGTFTNGENVIMFFEETNGIYTLTCWDKQGKINKE
EEEECCCCEECCCCCCHHCCCCEEECCEEECCCEEEEEEECCCCEEEEEEECCCCCCCCC
GTLTAITKEKNLSVESMAVFEDKIYVYSYKSNKVYVISQDLKLLHAWNIEGEMRKVVPEK
CCEEEEEECCCCCHHHEEEEECEEEEEEECCCEEEEEECCCEEEEEECCCCHHHHHCHHH
WGSSVKFVLQRELNELFIYNYVQPEQGIYQLTKTGLEKLEYGQEKYKDMYLYANEGFYSL
HCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHCCEEEEEECCCEEEC
HEKQVIRTDTEDIYQGVLMKNGDYYFITSKDFSHPQKESEEGKVYLNKVSKKKLPSFLDS
CCCHHEECCHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH
LKSKE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA