Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116871487

Identifier: 116871487

GI number: 116871487

Start: 65538

End: 66317

Strand: Direct

Name: 116871487

Synonym: lwe0065

Alternate gene names: NA

Gene position: 65538-66317 (Clockwise)

Preceding gene: 116871486

Following gene: 116871488

Centisome position: 2.33

GC content: 33.08

Gene sequence:

>780_bases
ATGAAACTGACCCGAACAAAAAGACTCTGGTTAATACTGCTACTAATGATTACTGCATATCTGCTTATGTACTCAGTGGT
AAGTGATAGGAAAACTAGTCATAACCATGAAAATACAGCGACCCTCACCAAATCGCAAACGACCAAAACAGGAGATAACG
GCACAATAACCAAACAAACTATCACGAATGATGATTCCGAAGAAGAGCAAGAGATAGAACTCTCATATTACGATACGATA
GAAGATGCGGTGAAAAACAATACTTTTGCTAAAGATAGTGATGCTAAGGATAGCCCTAATCTTAATAAAAAAGTAATCAA
AGAAAAAGTACTTTTACTAGAAAATGAAACAAATGCAATTTTATTTTTCATTGGAAATGTAAGAGAGACCGATAATCATG
AAGATTCATTGGTCGTTTATAAATTCAAAGTTAAAAAAGAAGGAAGTAAAAAGAAATATTCAACACCAACAAACGCGACC
CAGATTTCTGGATTTTTTGCTAAAAATAATTATGAAATTAGAGATGGTGAGTATGAAATTCAGACATGTTTAAATTTGTA
CAATACCTATCAAATCTTCAATCTCTACCCAGAAACTAGCCAGCTTCAATGGGGGACCTCTTACAATAAAAATGCACCTA
AGCTAACCATTAATGGAAAACACCCCACAAAAGTGATTCCTATAGTATTAGATGGAGATGACTGCTATTTTTGGTATTAT
GAAGATCTAAAATACGATAGTTCCAAAAAAGCAGAAATCAGTTTCAAAAAGACAAAATGA

Upstream 100 bases:

>100_bases
GAAAGAACCCTGATTGCGCCTCCTAAGTTGACTAAACGCTAACTAAAAATTAAGTTATTATACTTTCTTTTCTAAAACAT
CATTGTAAGGAGCTAAAAAA

Downstream 100 bases:

>100_bases
AGAATAGAGCGAAACTTACAAGGATCATAAAATTATTTTAAAATAGAACGACAACAAATTTCAAAAGTATTTTAAGGTGA
TAAAAATACGCAAATAAGTT

Product: putative secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKLTRTKRLWLILLLMITAYLLMYSVVSDRKTSHNHENTATLTKSQTTKTGDNGTITKQTITNDDSEEEQEIELSYYDTI
EDAVKNNTFAKDSDAKDSPNLNKKVIKEKVLLLENETNAILFFIGNVRETDNHEDSLVVYKFKVKKEGSKKKYSTPTNAT
QISGFFAKNNYEIRDGEYEIQTCLNLYNTYQIFNLYPETSQLQWGTSYNKNAPKLTINGKHPTKVIPIVLDGDDCYFWYY
EDLKYDSSKKAEISFKKTK

Sequences:

>Translated_259_residues
MKLTRTKRLWLILLLMITAYLLMYSVVSDRKTSHNHENTATLTKSQTTKTGDNGTITKQTITNDDSEEEQEIELSYYDTI
EDAVKNNTFAKDSDAKDSPNLNKKVIKEKVLLLENETNAILFFIGNVRETDNHEDSLVVYKFKVKKEGSKKKYSTPTNAT
QISGFFAKNNYEIRDGEYEIQTCLNLYNTYQIFNLYPETSQLQWGTSYNKNAPKLTINGKHPTKVIPIVLDGDDCYFWYY
EDLKYDSSKKAEISFKKTK
>Mature_259_residues
MKLTRTKRLWLILLLMITAYLLMYSVVSDRKTSHNHENTATLTKSQTTKTGDNGTITKQTITNDDSEEEQEIELSYYDTI
EDAVKNNTFAKDSDAKDSPNLNKKVIKEKVLLLENETNAILFFIGNVRETDNHEDSLVVYKFKVKKEGSKKKYSTPTNAT
QISGFFAKNNYEIRDGEYEIQTCLNLYNTYQIFNLYPETSQLQWGTSYNKNAPKLTINGKHPTKVIPIVLDGDDCYFWYY
EDLKYDSSKKAEISFKKTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29981; Mature: 29981

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTRTKRLWLILLLMITAYLLMYSVVSDRKTSHNHENTATLTKSQTTKTGDNGTITKQT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEE
ITNDDSEEEQEIELSYYDTIEDAVKNNTFAKDSDAKDSPNLNKKVIKEKVLLLENETNAI
ECCCCCCCHHEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHEEEEEECCCCEE
LFFIGNVRETDNHEDSLVVYKFKVKKEGSKKKYSTPTNATQISGFFAKNNYEIRDGEYEI
EEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCHH
QTCLNLYNTYQIFNLYPETSQLQWGTSYNKNAPKLTINGKHPTKVIPIVLDGDDCYFWYY
HHHHHHHHEEEEEEECCCCCCEEECCCCCCCCCEEEECCCCCCEEEEEEEECCCEEEEEE
EDLKYDSSKKAEISFKKTK
ECCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKLTRTKRLWLILLLMITAYLLMYSVVSDRKTSHNHENTATLTKSQTTKTGDNGTITKQT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEE
ITNDDSEEEQEIELSYYDTIEDAVKNNTFAKDSDAKDSPNLNKKVIKEKVLLLENETNAI
ECCCCCCCHHEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHEEEEEECCCCEE
LFFIGNVRETDNHEDSLVVYKFKVKKEGSKKKYSTPTNATQISGFFAKNNYEIRDGEYEI
EEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCHH
QTCLNLYNTYQIFNLYPETSQLQWGTSYNKNAPKLTINGKHPTKVIPIVLDGDDCYFWYY
HHHHHHHHEEEEEEECCCCCCEEECCCCCCCCCEEEECCCCCCEEEEEEEECCCEEEEEE
EDLKYDSSKKAEISFKKTK
ECCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA