| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871485
Identifier: 116871485
GI number: 116871485
Start: 64434
End: 65210
Strand: Direct
Name: 116871485
Synonym: lwe0063
Alternate gene names: NA
Gene position: 64434-65210 (Clockwise)
Preceding gene: 116871484
Following gene: 116871486
Centisome position: 2.29
GC content: 35.78
Gene sequence:
>777_bases ATGAAACTGACTCGAACAAAAAGACTCTGGTTAATACTGCTACTAATGATTACTGCATATTTGCTTATGTACTCAGTGGT AAGTGATAGGGAAACCAGTCATAACCATGAAAATACAGCGACTATCACCAAATCGCAAACGACCAAAACTGGAGATAACG GAACAATAACCAAACAAACTATCACGAATGATGATTCCGAAGCAGAGCAAGAGGTAGAACGTTCTTATTACAATACTATA GAAGATGCGGTGAAGGGCAGTAATTTTGCCATAGAAGAAGGTGAAGAGGTTTCGTACACTAATAAAAAAGAAATTAAAGA AAAGGTGCTTTTCTTGGAGAGCGATACAGATGCGCTATTATTTTTTATTGGAAATTTCATTGAAAATAAGGATGATAGTG ATGCTTTAGTTGTCTATAAATTCAAAGTCAAAAAAGAGGGAAACCAAACCAAATACTCTACACCAACAAACGCAACGCAA ATACCAGCGGAAAGTGAAAAAAGAATCTATAGACGTGGAGGGAGTAAATACGAGATTCGAACTTGTTTAAACTTATACAA TGCCTATCAAAGTTTCAACCTCTATCCAGAAACTAGCCAGCTTCAATGGGGGATGTCGTACAATAAAAGCGCTCCTAATT TAACCATTAACGGAGACAGACCTACAAAAGTGATTCCTATAAAAATGGACGGAGATGACTGCTATTTTTGGTATTATGAA GACTTGAAATACGATAGTTCCAAAAAAGCAGAAATCAGTTTTAAAAAGACAAAATGA
Upstream 100 bases:
>100_bases GAAATGTATAAAGATAATATAAATTGGATAGTATTGGTGTATAAAATAACGGCTTCTAAAAACATAATTAGAGTGAATCA ACATACGAGGAGCTAAAAAA
Downstream 100 bases:
>100_bases AGCTCAAAGCTAAGATGAAAAAATAATCTGAGAGAACGGAAGGTTTCTCAGATTATTTCCTTTGGATAAAAAAATAGCTA AGAGGAGTGGAATCTTACTT
Product: putative secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKLTRTKRLWLILLLMITAYLLMYSVVSDRETSHNHENTATITKSQTTKTGDNGTITKQTITNDDSEAEQEVERSYYNTI EDAVKGSNFAIEEGEEVSYTNKKEIKEKVLFLESDTDALLFFIGNFIENKDDSDALVVYKFKVKKEGNQTKYSTPTNATQ IPAESEKRIYRRGGSKYEIRTCLNLYNAYQSFNLYPETSQLQWGMSYNKSAPNLTINGDRPTKVIPIKMDGDDCYFWYYE DLKYDSSKKAEISFKKTK
Sequences:
>Translated_258_residues MKLTRTKRLWLILLLMITAYLLMYSVVSDRETSHNHENTATITKSQTTKTGDNGTITKQTITNDDSEAEQEVERSYYNTI EDAVKGSNFAIEEGEEVSYTNKKEIKEKVLFLESDTDALLFFIGNFIENKDDSDALVVYKFKVKKEGNQTKYSTPTNATQ IPAESEKRIYRRGGSKYEIRTCLNLYNAYQSFNLYPETSQLQWGMSYNKSAPNLTINGDRPTKVIPIKMDGDDCYFWYYE DLKYDSSKKAEISFKKTK >Mature_258_residues MKLTRTKRLWLILLLMITAYLLMYSVVSDRETSHNHENTATITKSQTTKTGDNGTITKQTITNDDSEAEQEVERSYYNTI EDAVKGSNFAIEEGEEVSYTNKKEIKEKVLFLESDTDALLFFIGNFIENKDDSDALVVYKFKVKKEGNQTKYSTPTNATQ IPAESEKRIYRRGGSKYEIRTCLNLYNAYQSFNLYPETSQLQWGMSYNKSAPNLTINGDRPTKVIPIKMDGDDCYFWYYE DLKYDSSKKAEISFKKTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29824; Mature: 29824
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTRTKRLWLILLLMITAYLLMYSVVSDRETSHNHENTATITKSQTTKTGDNGTITKQT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE ITNDDSEAEQEVERSYYNTIEDAVKGSNFAIEEGEEVSYTNKKEIKEKVLFLESDTDALL ECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHEEEEECCCCCHH FFIGNFIENKDDSDALVVYKFKVKKEGNQTKYSTPTNATQIPAESEKRIYRRGGSKYEIR HHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHH TCLNLYNAYQSFNLYPETSQLQWGMSYNKSAPNLTINGDRPTKVIPIKMDGDDCYFWYYE HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEECCCCCCEEEEEEECCCEEEEEEEE DLKYDSSKKAEISFKKTK CCCCCCCCCEEEEEECCC >Mature Secondary Structure MKLTRTKRLWLILLLMITAYLLMYSVVSDRETSHNHENTATITKSQTTKTGDNGTITKQT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE ITNDDSEAEQEVERSYYNTIEDAVKGSNFAIEEGEEVSYTNKKEIKEKVLFLESDTDALL ECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHEEEEECCCCCHH FFIGNFIENKDDSDALVVYKFKVKKEGNQTKYSTPTNATQIPAESEKRIYRRGGSKYEIR HHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHH TCLNLYNAYQSFNLYPETSQLQWGMSYNKSAPNLTINGDRPTKVIPIKMDGDDCYFWYYE HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEECCCCCCEEEEEEECCCEEEEEEEE DLKYDSSKKAEISFKKTK CCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA