Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116871485

Identifier: 116871485

GI number: 116871485

Start: 64434

End: 65210

Strand: Direct

Name: 116871485

Synonym: lwe0063

Alternate gene names: NA

Gene position: 64434-65210 (Clockwise)

Preceding gene: 116871484

Following gene: 116871486

Centisome position: 2.29

GC content: 35.78

Gene sequence:

>777_bases
ATGAAACTGACTCGAACAAAAAGACTCTGGTTAATACTGCTACTAATGATTACTGCATATTTGCTTATGTACTCAGTGGT
AAGTGATAGGGAAACCAGTCATAACCATGAAAATACAGCGACTATCACCAAATCGCAAACGACCAAAACTGGAGATAACG
GAACAATAACCAAACAAACTATCACGAATGATGATTCCGAAGCAGAGCAAGAGGTAGAACGTTCTTATTACAATACTATA
GAAGATGCGGTGAAGGGCAGTAATTTTGCCATAGAAGAAGGTGAAGAGGTTTCGTACACTAATAAAAAAGAAATTAAAGA
AAAGGTGCTTTTCTTGGAGAGCGATACAGATGCGCTATTATTTTTTATTGGAAATTTCATTGAAAATAAGGATGATAGTG
ATGCTTTAGTTGTCTATAAATTCAAAGTCAAAAAAGAGGGAAACCAAACCAAATACTCTACACCAACAAACGCAACGCAA
ATACCAGCGGAAAGTGAAAAAAGAATCTATAGACGTGGAGGGAGTAAATACGAGATTCGAACTTGTTTAAACTTATACAA
TGCCTATCAAAGTTTCAACCTCTATCCAGAAACTAGCCAGCTTCAATGGGGGATGTCGTACAATAAAAGCGCTCCTAATT
TAACCATTAACGGAGACAGACCTACAAAAGTGATTCCTATAAAAATGGACGGAGATGACTGCTATTTTTGGTATTATGAA
GACTTGAAATACGATAGTTCCAAAAAAGCAGAAATCAGTTTTAAAAAGACAAAATGA

Upstream 100 bases:

>100_bases
GAAATGTATAAAGATAATATAAATTGGATAGTATTGGTGTATAAAATAACGGCTTCTAAAAACATAATTAGAGTGAATCA
ACATACGAGGAGCTAAAAAA

Downstream 100 bases:

>100_bases
AGCTCAAAGCTAAGATGAAAAAATAATCTGAGAGAACGGAAGGTTTCTCAGATTATTTCCTTTGGATAAAAAAATAGCTA
AGAGGAGTGGAATCTTACTT

Product: putative secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKLTRTKRLWLILLLMITAYLLMYSVVSDRETSHNHENTATITKSQTTKTGDNGTITKQTITNDDSEAEQEVERSYYNTI
EDAVKGSNFAIEEGEEVSYTNKKEIKEKVLFLESDTDALLFFIGNFIENKDDSDALVVYKFKVKKEGNQTKYSTPTNATQ
IPAESEKRIYRRGGSKYEIRTCLNLYNAYQSFNLYPETSQLQWGMSYNKSAPNLTINGDRPTKVIPIKMDGDDCYFWYYE
DLKYDSSKKAEISFKKTK

Sequences:

>Translated_258_residues
MKLTRTKRLWLILLLMITAYLLMYSVVSDRETSHNHENTATITKSQTTKTGDNGTITKQTITNDDSEAEQEVERSYYNTI
EDAVKGSNFAIEEGEEVSYTNKKEIKEKVLFLESDTDALLFFIGNFIENKDDSDALVVYKFKVKKEGNQTKYSTPTNATQ
IPAESEKRIYRRGGSKYEIRTCLNLYNAYQSFNLYPETSQLQWGMSYNKSAPNLTINGDRPTKVIPIKMDGDDCYFWYYE
DLKYDSSKKAEISFKKTK
>Mature_258_residues
MKLTRTKRLWLILLLMITAYLLMYSVVSDRETSHNHENTATITKSQTTKTGDNGTITKQTITNDDSEAEQEVERSYYNTI
EDAVKGSNFAIEEGEEVSYTNKKEIKEKVLFLESDTDALLFFIGNFIENKDDSDALVVYKFKVKKEGNQTKYSTPTNATQ
IPAESEKRIYRRGGSKYEIRTCLNLYNAYQSFNLYPETSQLQWGMSYNKSAPNLTINGDRPTKVIPIKMDGDDCYFWYYE
DLKYDSSKKAEISFKKTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29824; Mature: 29824

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTRTKRLWLILLLMITAYLLMYSVVSDRETSHNHENTATITKSQTTKTGDNGTITKQT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE
ITNDDSEAEQEVERSYYNTIEDAVKGSNFAIEEGEEVSYTNKKEIKEKVLFLESDTDALL
ECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHEEEEECCCCCHH
FFIGNFIENKDDSDALVVYKFKVKKEGNQTKYSTPTNATQIPAESEKRIYRRGGSKYEIR
HHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHH
TCLNLYNAYQSFNLYPETSQLQWGMSYNKSAPNLTINGDRPTKVIPIKMDGDDCYFWYYE
HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEECCCCCCEEEEEEECCCEEEEEEEE
DLKYDSSKKAEISFKKTK
CCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MKLTRTKRLWLILLLMITAYLLMYSVVSDRETSHNHENTATITKSQTTKTGDNGTITKQT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE
ITNDDSEAEQEVERSYYNTIEDAVKGSNFAIEEGEEVSYTNKKEIKEKVLFLESDTDALL
ECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHEEEEECCCCCHH
FFIGNFIENKDDSDALVVYKFKVKKEGNQTKYSTPTNATQIPAESEKRIYRRGGSKYEIR
HHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHH
TCLNLYNAYQSFNLYPETSQLQWGMSYNKSAPNLTINGDRPTKVIPIKMDGDDCYFWYYE
HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEECCCCCCEEEEEEECCCEEEEEEEE
DLKYDSSKKAEISFKKTK
CCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA