Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116871477

Identifier: 116871477

GI number: 116871477

Start: 57640

End: 59016

Strand: Direct

Name: 116871477

Synonym: lwe0055

Alternate gene names: NA

Gene position: 57640-59016 (Clockwise)

Preceding gene: 116871476

Following gene: 116871478

Centisome position: 2.05

GC content: 33.33

Gene sequence:

>1377_bases
ATGGGGAAAAAAATTGATTTTGACGAAATCCAGAATGCTTCTAACGACTTTAATGAAGGTAGTAATGAAGAAATAATACG
ATTATATTCTTTATTAGAAAACATAGATGAAATAGGGGCTTTGGAATCTTTTCAAGGTAAAACAGCACAAACTGCGAAAG
CTTATTTGAATGAGGTTCATGGCACTGTTATGATTTTATTAATCACAGCATTGACTCAAGTGAGAGAAATGGTTGTTGAA
GATATTGATAGGTTTCAACAAGATGTAGATAGTGCTCCTACAACAAAAATTGACCAAATTTATATAAAAGAATTAAAGAA
AAAAATTGAAAAAAATTATTCTGAATTTAAGATTATACATGAAGATATTAACAAAACTGTTAATAGGTTGAATGATTTAG
TACCTAATGCAGTACCCTCAAAAACTGCTATAAAGGCAAGTAAGGATAATTTCATTCAAAACATTAATTTACTAAATACT
CACCTAGATAATTATGATGAACGCAAACGTGGTGGGATAAATGAAGTAAAAAAAATCTTCAAACAGATAGAATCTATATT
AATAAGCGAGGCGAGCTATCATAATAATGATAAAGGTTTGATTATTTATAGCCCGGGTGATATTTATGGACAAGATGGTG
TGGATAAAGAGTTAATTAATGGGAAAATGTTAGATTTTTTAGGATTAGGAGGAGACACACTTTCTATGGCTATTTCTTCT
AAAGAATTAGCGGTATTGGCAATGAATAAAGGCCTCACAGTTCAAAGTAGGATGGTTCGAGGCAAACTAGTATATACAAT
ATATGGGACCAAAGATCAATTGCAAAAATTGAATGTGAAAATGAATGCTTCAGCTAGAAGTAAATCAATTGTAAAACTTT
ATGATGGTAGTAAAACAAATAAGTATACTAAATATGGAGCTGCATTTATGGAGGAATTCCCTCTTTTGCGAGGAATGACC
CATAGTAAGGCTGAGATGCTAAAAGGATTTAGTGCAAGTATGAAGGAGCCTTATACAGGGGGATATAAAAATTTGTCTAA
GGCGGGAAAATTAGCGAAAGGGCTAGGAGCTTTTGGTGCGGCAATGACAGTTGCATCTAATATCAATAGTGAATTAGCAG
ATGGTTTCCAAGGATATACTGATGTGAGAAGGATTACAGTAAATTCAACTGTTGATTTGGGGGTTTCAGGAGGTTTAACA
GCAGTACTTGGACAAGCGGGGAGTTCTTTTGGACTTCCAGGTACAATAGGTGGAATAGGAGTTGGAGTAGTGTTGGATAC
GGTTCTGAGTTTAAGTGGTACAAAAGATACTTGGAAAAATAGTGTTAACGAAAATATGCAACATTTAGAAGATTGGTTTT
GGGTAGAAGCAAAATAA

Upstream 100 bases:

>100_bases
AAAACTGTAGAGTCAATGGAACAATTAGATAAAGAAATTGGAAATGGAATAGCTAGTAAAAATTTATATAGTATAAAAAA
GAATCTAGGGGTGAAAAAAG

Downstream 100 bases:

>100_bases
AACAAGTCTATTAGTTCAGTGAAGTATTGAGGATTTTCTATTTTAAAAACCCAAAAACTTGATAAAAATAACACTTTTCA
ATAAAGAAGTTAGACTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MGKKIDFDEIQNASNDFNEGSNEEIIRLYSLLENIDEIGALESFQGKTAQTAKAYLNEVHGTVMILLITALTQVREMVVE
DIDRFQQDVDSAPTTKIDQIYIKELKKKIEKNYSEFKIIHEDINKTVNRLNDLVPNAVPSKTAIKASKDNFIQNINLLNT
HLDNYDERKRGGINEVKKIFKQIESILISEASYHNNDKGLIIYSPGDIYGQDGVDKELINGKMLDFLGLGGDTLSMAISS
KELAVLAMNKGLTVQSRMVRGKLVYTIYGTKDQLQKLNVKMNASARSKSIVKLYDGSKTNKYTKYGAAFMEEFPLLRGMT
HSKAEMLKGFSASMKEPYTGGYKNLSKAGKLAKGLGAFGAAMTVASNINSELADGFQGYTDVRRITVNSTVDLGVSGGLT
AVLGQAGSSFGLPGTIGGIGVGVVLDTVLSLSGTKDTWKNSVNENMQHLEDWFWVEAK

Sequences:

>Translated_458_residues
MGKKIDFDEIQNASNDFNEGSNEEIIRLYSLLENIDEIGALESFQGKTAQTAKAYLNEVHGTVMILLITALTQVREMVVE
DIDRFQQDVDSAPTTKIDQIYIKELKKKIEKNYSEFKIIHEDINKTVNRLNDLVPNAVPSKTAIKASKDNFIQNINLLNT
HLDNYDERKRGGINEVKKIFKQIESILISEASYHNNDKGLIIYSPGDIYGQDGVDKELINGKMLDFLGLGGDTLSMAISS
KELAVLAMNKGLTVQSRMVRGKLVYTIYGTKDQLQKLNVKMNASARSKSIVKLYDGSKTNKYTKYGAAFMEEFPLLRGMT
HSKAEMLKGFSASMKEPYTGGYKNLSKAGKLAKGLGAFGAAMTVASNINSELADGFQGYTDVRRITVNSTVDLGVSGGLT
AVLGQAGSSFGLPGTIGGIGVGVVLDTVLSLSGTKDTWKNSVNENMQHLEDWFWVEAK
>Mature_457_residues
GKKIDFDEIQNASNDFNEGSNEEIIRLYSLLENIDEIGALESFQGKTAQTAKAYLNEVHGTVMILLITALTQVREMVVED
IDRFQQDVDSAPTTKIDQIYIKELKKKIEKNYSEFKIIHEDINKTVNRLNDLVPNAVPSKTAIKASKDNFIQNINLLNTH
LDNYDERKRGGINEVKKIFKQIESILISEASYHNNDKGLIIYSPGDIYGQDGVDKELINGKMLDFLGLGGDTLSMAISSK
ELAVLAMNKGLTVQSRMVRGKLVYTIYGTKDQLQKLNVKMNASARSKSIVKLYDGSKTNKYTKYGAAFMEEFPLLRGMTH
SKAEMLKGFSASMKEPYTGGYKNLSKAGKLAKGLGAFGAAMTVASNINSELADGFQGYTDVRRITVNSTVDLGVSGGLTA
VLGQAGSSFGLPGTIGGIGVGVVLDTVLSLSGTKDTWKNSVNENMQHLEDWFWVEAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50379; Mature: 50248

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKIDFDEIQNASNDFNEGSNEEIIRLYSLLENIDEIGALESFQGKTAQTAKAYLNEVH
CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHH
GTVMILLITALTQVREMVVEDIDRFQQDVDSAPTTKIDQIYIKELKKKIEKNYSEFKIIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
EDINKTVNRLNDLVPNAVPSKTAIKASKDNFIQNINLLNTHLDNYDERKRGGINEVKKIF
HHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHH
KQIESILISEASYHNNDKGLIIYSPGDIYGQDGVDKELINGKMLDFLGLGGDTLSMAISS
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHCCHHHHHHCCCCCHHHEEECC
KELAVLAMNKGLTVQSRMVRGKLVYTIYGTKDQLQKLNVKMNASARSKSIVKLYDGSKTN
CCEEEEEECCCCCHHHHHHCCEEEEEEECCHHHHHHHCEEECCCCCCCCEEEEECCCCCC
KYTKYGAAFMEEFPLLRGMTHSKAEMLKGFSASMKEPYTGGYKNLSKAGKLAKGLGAFGA
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
AMTVASNINSELADGFQGYTDVRRITVNSTVDLGVSGGLTAVLGQAGSSFGLPGTIGGIG
HHHHHHHCCHHHHHHHCCHHHHEEEEECCEEECCCCCCHHHHHHCCCCCCCCCCCHHHHH
VGVVLDTVLSLSGTKDTWKNSVNENMQHLEDWFWVEAK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure 
GKKIDFDEIQNASNDFNEGSNEEIIRLYSLLENIDEIGALESFQGKTAQTAKAYLNEVH
CCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHH
GTVMILLITALTQVREMVVEDIDRFQQDVDSAPTTKIDQIYIKELKKKIEKNYSEFKIIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
EDINKTVNRLNDLVPNAVPSKTAIKASKDNFIQNINLLNTHLDNYDERKRGGINEVKKIF
HHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHH
KQIESILISEASYHNNDKGLIIYSPGDIYGQDGVDKELINGKMLDFLGLGGDTLSMAISS
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHCCHHHHHHCCCCCHHHEEECC
KELAVLAMNKGLTVQSRMVRGKLVYTIYGTKDQLQKLNVKMNASARSKSIVKLYDGSKTN
CCEEEEEECCCCCHHHHHHCCEEEEEEECCHHHHHHHCEEECCCCCCCCEEEEECCCCCC
KYTKYGAAFMEEFPLLRGMTHSKAEMLKGFSASMKEPYTGGYKNLSKAGKLAKGLGAFGA
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
AMTVASNINSELADGFQGYTDVRRITVNSTVDLGVSGGLTAVLGQAGSSFGLPGTIGGIG
HHHHHHHCCHHHHHHHCCHHHHEEEEECCEEECCCCCCHHHHHHCCCCCCCCCCCHHHHH
VGVVLDTVLSLSGTKDTWKNSVNENMQHLEDWFWVEAK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA