| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871471
Identifier: 116871471
GI number: 116871471
Start: 50420
End: 50923
Strand: Direct
Name: 116871471
Synonym: lwe0049
Alternate gene names: NA
Gene position: 50420-50923 (Clockwise)
Preceding gene: 116871470
Following gene: 116871472
Centisome position: 1.79
GC content: 35.71
Gene sequence:
>504_bases ATGAAATTTAAAATGGCAGCATTATTGCTATTAGTTTGCTTTGCTTTTTCTCCTAGTGTACTTGCGGCCGAATCGGATAG TTATTTAGAAAACAGCGGAAAAATGGATATTAAAACCGATCGACTTCAAAAAACAGATGAAGAGAAGAAGAAAGAGCTTG AAAAAATGGAAGAAACCGAACTTGATAAAAACGGTATCCCACTTTTTACAGATGAATGGGATAAAAAAGTATCTAAACAA AAAGAAACAGAGAAAGCTGAATATGACCGTATTAAAAATGCTCTTTTTGAAGAAGAGCCCACTTCCGGAGAAACAGTGAA AACAACAAAAGAAAAACTTTTTTCTGGAAAATATGAAACAACGAGTAATAAGGCTGCTATGACAACGAATACGGAAGATG AAACTAAAAATACAAAGCAAAAAACAGTTGGCGGAGCAATCGCTGGAACACTCCTGGCATTAGCAGGTGGGATTTATGCA GCAGCACGCAATGTTTTTGAATAG
Upstream 100 bases:
>100_bases ATTGTTTATAGCTTAATTGGTGCAACAGTGTTATTTACTGCACTCAACCTGTTTGTTTGGCACCGTTCTAAAAATGAAGA ACAAGAGGAGGAGCATTCGG
Downstream 100 bases:
>100_bases AAGTGAGGAATTGAAATGGCTAAAAATACACATATGAATGTGACTGTTGATTTTACAAACTGGGGCGCAGATAAATACGA TCTGCGCATTCCAGTACATC
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKFKMAALLLLVCFAFSPSVLAAESDSYLENSGKMDIKTDRLQKTDEEKKKELEKMEETELDKNGIPLFTDEWDKKVSKQ KETEKAEYDRIKNALFEEEPTSGETVKTTKEKLFSGKYETTSNKAAMTTNTEDETKNTKQKTVGGAIAGTLLALAGGIYA AARNVFE
Sequences:
>Translated_167_residues MKFKMAALLLLVCFAFSPSVLAAESDSYLENSGKMDIKTDRLQKTDEEKKKELEKMEETELDKNGIPLFTDEWDKKVSKQ KETEKAEYDRIKNALFEEEPTSGETVKTTKEKLFSGKYETTSNKAAMTTNTEDETKNTKQKTVGGAIAGTLLALAGGIYA AARNVFE >Mature_167_residues MKFKMAALLLLVCFAFSPSVLAAESDSYLENSGKMDIKTDRLQKTDEEKKKELEKMEETELDKNGIPLFTDEWDKKVSKQ KETEKAEYDRIKNALFEEEPTSGETVKTTKEKLFSGKYETTSNKAAMTTNTEDETKNTKQKTVGGAIAGTLLALAGGIYA AARNVFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18654; Mature: 18654
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKMAALLLLVCFAFSPSVLAAESDSYLENSGKMDIKTDRLQKTDEEKKKELEKMEETE CCHHHHHHHHHHHHHCCCCCEECCCCHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHH LDKNGIPLFTDEWDKKVSKQKETEKAEYDRIKNALFEEEPTSGETVKTTKEKLFSGKYET CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC TSNKAAMTTNTEDETKNTKQKTVGGAIAGTLLALAGGIYAAARNVFE CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFKMAALLLLVCFAFSPSVLAAESDSYLENSGKMDIKTDRLQKTDEEKKKELEKMEETE CCHHHHHHHHHHHHHCCCCCEECCCCHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHH LDKNGIPLFTDEWDKKVSKQKETEKAEYDRIKNALFEEEPTSGETVKTTKEKLFSGKYET CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC TSNKAAMTTNTEDETKNTKQKTVGGAIAGTLLALAGGIYAAARNVFE CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA