| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is levE [H]
Identifier: 116871447
GI number: 116871447
Start: 26174
End: 26665
Strand: Direct
Name: levE [H]
Synonym: lwe0025
Alternate gene names: 116871447
Gene position: 26174-26665 (Clockwise)
Preceding gene: 116871446
Following gene: 116871448
Centisome position: 0.93
GC content: 35.37
Gene sequence:
>492_bases ATGGGAAGTAACGGAATTAAACATGTACGTGTTGATGAAAGACTAATTCATGGACAAGTAGCAACAATGTGGACTAATAC CATAAAGGCAACGCGAATTATGATTGTTGACGATGCCGTTGTAAAAAATGATATGGAAAAAATGGCACTCAAAACCGCAG TACCAGCTGGCGTTAAACTAAGTATCCTTACAGTAAAAGGGGCAGCGAACAATATCAATAATGATAAATACGTTGGTCAA CAAGTTTTCTTAATTGTAAAGTCACCCCATGCGCTTCGTGGTTTAGTGGATGCTGGTGTAGAACTTCCTCAAATTAATGT AGGAAACATGTCAACAAAAGCAGGGAGCCGCCAAATCAAAAAATCTGTTAGTGTAACAGATGAAAATTTGGAAGATTTTG ATTATTTATCCAAAAAAGGAATTAAAATCACAGCTCAAATGGTTCCTAGTGAAGATGCTATTGAATTTGCAAGTTTATTA AAAAATAAGTAA
Upstream 100 bases:
>100_bases GCTTAGAAGGAGCGATTATTGGCGCACAAGAAAATATTCAATTTGTGGAATTGAAAGCAAATAATTCGACAGTAAGCGAT GATGGAGAGGAAGAGGACTA
Downstream 100 bases:
>100_bases TAAGAAGGGAGAACTATAATGGATTTAGCAGTTTGGCAGATTATATTGTTGGTTATACTTGCAGCTTGTACCATTCTTGA TGCTTTAACTTTAGTAATAG
Product: PTS system mannose/fructose/sorbose family IIB subunit
Products: NA
Alternate protein names: EIIB-Fru; PTS system fructose-specific EIIB component; p18 [H]
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MGSNGIKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNDMEKMALKTAVPAGVKLSILTVKGAANNINNDKYVGQ QVFLIVKSPHALRGLVDAGVELPQINVGNMSTKAGSRQIKKSVSVTDENLEDFDYLSKKGIKITAQMVPSEDAIEFASLL KNK
Sequences:
>Translated_163_residues MGSNGIKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNDMEKMALKTAVPAGVKLSILTVKGAANNINNDKYVGQ QVFLIVKSPHALRGLVDAGVELPQINVGNMSTKAGSRQIKKSVSVTDENLEDFDYLSKKGIKITAQMVPSEDAIEFASLL KNK >Mature_162_residues GSNGIKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNDMEKMALKTAVPAGVKLSILTVKGAANNINNDKYVGQQ VFLIVKSPHALRGLVDAGVELPQINVGNMSTKAGSRQIKKSVSVTDENLEDFDYLSKKGIKITAQMVPSEDAIEFASLLK NK
Specific function: LevD and levE act as negative regulators of the levanase operon. They may be involved in a PTS-mediated phosphorylation of a regulator [H]
COG id: COG3444
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI1788120, Length=163, Percent_Identity=34.3558282208589, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI87082217, Length=153, Percent_Identity=32.6797385620915, Blast_Score=93, Evalue=8e-21, Organism=Escherichia coli, GI1789527, Length=152, Percent_Identity=36.1842105263158, Blast_Score=90, Evalue=7e-20,
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004720 - InterPro: IPR018455 [H]
Pfam domain/function: PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 17746; Mature: 17615
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS51101 PTS_EIIB_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSNGIKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNDMEKMALKTAVPAGVKL CCCCCCCEEEHHHHHHCCHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEE SILTVKGAANNINNDKYVGQQVFLIVKSPHALRGLVDAGVELPQINVGNMSTKAGSRQIK EEEEEECCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCCEECCCCCCCCCHHHHHH KSVSVTDENLEDFDYLSKKGIKITAQMVPSEDAIEFASLLKNK HHHCCCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCC >Mature Secondary Structure GSNGIKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNDMEKMALKTAVPAGVKL CCCCCCEEEHHHHHHCCHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEE SILTVKGAANNINNDKYVGQQVFLIVKSPHALRGLVDAGVELPQINVGNMSTKAGSRQIK EEEEEECCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCCEECCCCCCCCCHHHHHH KSVSVTDENLEDFDYLSKKGIKITAQMVPSEDAIEFASLLKNK HHHCCCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2117666; 9141695; 9384377; 9551099 [H]