| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116691176
Identifier: 116691176
GI number: 116691176
Start: 3476594
End: 3476842
Strand: Direct
Name: 116691176
Synonym: Bcen2424_3159
Alternate gene names: NA
Gene position: 3476594-3476842 (Clockwise)
Preceding gene: 116691175
Following gene: 116691177
Centisome position: 99.79
GC content: 65.46
Gene sequence:
>249_bases GTGAACGACAAGCTCACCACTCCTCCGCACGATATCCCGAACGAAACGATCGACCTGCAGATCGCCGATGTGCTGGCGGC CGTCCGCTATCCGGCGAACAAGGATGCGATCGTCGATGCCGCGCGCGACGCCGGCGCCAGCAACGAAGTGCTGTCGATGC TCGACGGCCTGCCCGAACAGGACTACGCGGACATCGACGCCGTCACGCACTGGGTCGCCGGCAACTTCGGCCCGGGGCTC GGCATTTGA
Upstream 100 bases:
>100_bases TCCGCGACAAGCGTCGGCCGGGGCGACCCGCGCCGCGTAACCTGCCGGGCACGCCCCTTGCGCTTCGATCCGATTCCCGC CCAACCCGCGAGACGCCGAC
Downstream 100 bases:
>100_bases GCGCCGGCCAATAACGCGATAGGATCGGGCCGCACCGGTCGCGCCGCGATCGGCAGGCGTGCCGCCCGGCGCAAGATCGG GCGTTCGGGCACGCGCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MNDKLTTPPHDIPNETIDLQIADVLAAVRYPANKDAIVDAARDAGASNEVLSMLDGLPEQDYADIDAVTHWVAGNFGPGL GI
Sequences:
>Translated_82_residues MNDKLTTPPHDIPNETIDLQIADVLAAVRYPANKDAIVDAARDAGASNEVLSMLDGLPEQDYADIDAVTHWVAGNFGPGL GI >Mature_82_residues MNDKLTTPPHDIPNETIDLQIADVLAAVRYPANKDAIVDAARDAGASNEVLSMLDGLPEQDYADIDAVTHWVAGNFGPGL GI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8686; Mature: 8686
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDKLTTPPHDIPNETIDLQIADVLAAVRYPANKDAIVDAARDAGASNEVLSMLDGLPEQ CCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCC DYADIDAVTHWVAGNFGPGLGI CCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNDKLTTPPHDIPNETIDLQIADVLAAVRYPANKDAIVDAARDAGASNEVLSMLDGLPEQ CCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCC DYADIDAVTHWVAGNFGPGLGI CCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA