| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is ada [H]
Identifier: 116691169
GI number: 116691169
Start: 3471095
End: 3472054
Strand: Reverse
Name: ada [H]
Synonym: Bcen2424_3151
Alternate gene names: 116691169
Gene position: 3472054-3471095 (Counterclockwise)
Preceding gene: 116691170
Following gene: 116691168
Centisome position: 99.66
GC content: 72.4
Gene sequence:
>960_bases TTGAGCATCGACACGACAACGATTACCTCCCTCGCGAACGGCGGCCCTGTGCCGCCGTCCGCGCAGATGGAGCTGCGCTA CAAGGCGCCGTACGACTGGGCGCGCGTGCTGCGCTTCTTCAGCGGGCGCGCGATTCCGGGCGTCGAGCAGGTCGCGGACG GCGTGTATCGCCGCATTGTCGATCTGCACGGCGATGCGGGCCGGCTCACCGTCACGAAACATCCGCGCAAGCATTGCCTG ATCGCGACCGTCGAAGGGGCGGTCGCGCGTCACGTCGACGATGCGTTCGCCGCACGCGTCGCGACGATGTTCGACCTCGG CGCCGATCCGGCCGCGATCGGCGGCGACCTCGCGCGCGATCCGTGGTTCGCGCCGCTCGTCGAGGCCGCGCCGGGGCTGC GCGTGCCGGGTGCGTGGTCGGGGTTCGAGCTGGCCGTGCGCGCGATCGTCGGCCAGCAGGTGAGCGTGAAGGCCGCGACG ACGATCGTTGGCCGGCTCGTCGAACGGGCCGGCGAACGTGTGATTCATGAAGACGACGGCGCGCCCGCGTGGCGGTTCCC GACGCCCGACGCGCTGGCCGCGTGCGATCTCGACAAGATCGGGATGCCCGGCAAGCGCGTGGCCGCGCTGACCGGCGTGG CGCGCGCGGTGGCGGCCGGCGACGTGCCGGTCGATCGTGCGCATGCCGACCTCGCGATGCTGCGCAGCGCGTGGCTCGAG CTGCCCGGCATCGGCCCGTGGACGGTCGAATACATCGCGATGCGCGCATGGCGCGACCCGGACGCGTGGCCGGCATCCGA TCTCGTGCTGATGCAGTCGATCGCCGCGCGCGACCCGGCGCTCGACCGGCTCGCCAGCCAGAAGCACCGCACCGAAGGCT GGCGGCCGTGGCGTGCGTATGCGGCGTTGCATCTGTGGAACGACGTGGCCGACCGGGCAGGCGGCGCGCGCGGCGGGTAA
Upstream 100 bases:
>100_bases GCTATCGCTGGGGCGTGCGCCGCAAGGCGACGCTGCTCGCGGCCGAGGCGCGCCATGTTCACAACGATGAAGCCGAAGCC GAGACGGAGGACAGTGCGGT
Downstream 100 bases:
>100_bases GCACGCCGCGGCAGGGGACGACCGCAAGGAGGCGGCGCCGCAACCCGTCGCGCACGCGGTGCCGGCATGCGGCAAGCGCC GGGGCGTGACGCGGCGCCGT
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: Regulatory protein of adaptative response; Methylated-DNA--protein-cysteine methyltransferase; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MSIDTTTITSLANGGPVPPSAQMELRYKAPYDWARVLRFFSGRAIPGVEQVADGVYRRIVDLHGDAGRLTVTKHPRKHCL IATVEGAVARHVDDAFAARVATMFDLGADPAAIGGDLARDPWFAPLVEAAPGLRVPGAWSGFELAVRAIVGQQVSVKAAT TIVGRLVERAGERVIHEDDGAPAWRFPTPDALAACDLDKIGMPGKRVAALTGVARAVAAGDVPVDRAHADLAMLRSAWLE LPGIGPWTVEYIAMRAWRDPDAWPASDLVLMQSIAARDPALDRLASQKHRTEGWRPWRAYAALHLWNDVADRAGGARGG
Sequences:
>Translated_319_residues MSIDTTTITSLANGGPVPPSAQMELRYKAPYDWARVLRFFSGRAIPGVEQVADGVYRRIVDLHGDAGRLTVTKHPRKHCL IATVEGAVARHVDDAFAARVATMFDLGADPAAIGGDLARDPWFAPLVEAAPGLRVPGAWSGFELAVRAIVGQQVSVKAAT TIVGRLVERAGERVIHEDDGAPAWRFPTPDALAACDLDKIGMPGKRVAALTGVARAVAAGDVPVDRAHADLAMLRSAWLE LPGIGPWTVEYIAMRAWRDPDAWPASDLVLMQSIAARDPALDRLASQKHRTEGWRPWRAYAALHLWNDVADRAGGARGG >Mature_318_residues SIDTTTITSLANGGPVPPSAQMELRYKAPYDWARVLRFFSGRAIPGVEQVADGVYRRIVDLHGDAGRLTVTKHPRKHCLI ATVEGAVARHVDDAFAARVATMFDLGADPAAIGGDLARDPWFAPLVEAAPGLRVPGAWSGFELAVRAIVGQQVSVKAATT IVGRLVERAGERVIHEDDGAPAWRFPTPDALAACDLDKIGMPGKRVAALTGVARAVAAGDVPVDRAHADLAMLRSAWLEL PGIGPWTVEYIAMRAWRDPDAWPASDLVLMQSIAARDPALDRLASQKHRTEGWRPWRAYAALHLWNDVADRAGGARGG
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus [H]
COG id: COG0122
COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788383, Length=285, Percent_Identity=35.4385964912281, Blast_Score=154, Evalue=9e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR010316 - InterPro: IPR011257 - InterPro: IPR003265 - InterPro: IPR003583 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR023170 - InterPro: IPR012294 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF06029 AlkA_N; PF00730 HhH-GPD [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 34260; Mature: 34129
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDTTTITSLANGGPVPPSAQMELRYKAPYDWARVLRFFSGRAIPGVEQVADGVYRRIV CCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH DLHGDAGRLTVTKHPRKHCLIATVEGAVARHVDDAFAARVATMFDLGADPAAIGGDLARD HHCCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC PWFAPLVEAAPGLRVPGAWSGFELAVRAIVGQQVSVKAATTIVGRLVERAGERVIHEDDG CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECCCC APAWRFPTPDALAACDLDKIGMPGKRVAALTGVARAVAAGDVPVDRAHADLAMLRSAWLE CCCCCCCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC LPGIGPWTVEYIAMRAWRDPDAWPASDLVLMQSIAARDPALDRLASQKHRTEGWRPWRAY CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHH AALHLWNDVADRAGGARGG HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SIDTTTITSLANGGPVPPSAQMELRYKAPYDWARVLRFFSGRAIPGVEQVADGVYRRIV CCCHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH DLHGDAGRLTVTKHPRKHCLIATVEGAVARHVDDAFAARVATMFDLGADPAAIGGDLARD HHCCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC PWFAPLVEAAPGLRVPGAWSGFELAVRAIVGQQVSVKAATTIVGRLVERAGERVIHEDDG CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECCCC APAWRFPTPDALAACDLDKIGMPGKRVAALTGVARAVAAGDVPVDRAHADLAMLRSAWLE CCCCCCCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC LPGIGPWTVEYIAMRAWRDPDAWPASDLVLMQSIAARDPALDRLASQKHRTEGWRPWRAY CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHH AALHLWNDVADRAGGARGG HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]