| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is metK [H]
Identifier: 116691099
GI number: 116691099
Start: 3395151
End: 3396338
Strand: Reverse
Name: metK [H]
Synonym: Bcen2424_3081
Alternate gene names: 116691099
Gene position: 3396338-3395151 (Counterclockwise)
Preceding gene: 116691101
Following gene: 116691097
Centisome position: 97.49
GC content: 65.07
Gene sequence:
>1188_bases GTGGCAAACGATTATCTCTTCACGTCCGAATCCGTCTCCGAAGGCCATCCGGACAAAGTCGCGGACCAAATCTCGGACGC GATTCTCGACGCCATCCTCGAGCAGGACAAATACTCCCGCGTTGCGGCGGAAACGCTGTGCAACACGGGTCTCGTCGTGC TGGCCGGTGAAATCACCACGACGGCCAACATCGATTACATCCAGATCGCGCGCGATACGATCAAGCGCATCGGCTACGAC AACACCGACTACGGCATCGACTACAAGGGTTGCGCGGTGCTCGTCGCGTACGACAAGCAGTCGCCGGACATCGCGCAGGG CGTCGATCGTGCACACGACGACAACCTCGACCAAGGCGCGGGCGACCAGGGCCTGATGTTCGGTTATGCGTGCGACGAAA CGCCGGAACTGATGCCGCTGCCGATCTACCTGTCGCACCGCCTCGTCGAGCGTCAGGCGAGCCTGCGCCGCGACGGTCGC CTGCAATGGCTGCGTCCGGACGCGAAGTCGCAGGTCACCGTCCGCTACGTCGACGGCAAGCCCGATTCGATCGACACCGT CGTGCTGTCGACGCAGCACGCACCGGACATCGAGCTGCCCGCGCTGCGCGAAGCCGTGATCGAGGAAATCATCAAGCCGA CGCTGCCGGCCGAGCTGATCAAGGGCGACATCAAGTTCCTCGTGAACCCGACCGGCCGGTTCGTGATCGGCGGCCCGCAG GGCGATTGCGGCCTGACCGGCCGCAAGATCATCGTCGATACCTACGGCGGTGCCGCACCGCACGGCGGCGGCGCGTTCTC GGGCAAGGATCCGTCGAAGGTCGACCGTTCGGCTGCGTATGCCGGCCGTTACGTCGCGAAGAACATCGTCGCCGCCGGCC TCGCGTCGCGCGCGCTGATCCAGGTGTCGTACGCGATCGGCGTGGCCGAGCCGACCTCGGTGATGGTCAACACGTTCGGC ACAGGCCGCGTGTCGGATGCGGTGATCACGAAGCTCGTGCGCGAGCATTTCGACCTGCGTCCGAAGGGCATCATCAAGAT GCTCGACCTGCTGCGCCCGATTTACGAGAAGACCGCCGCTTACGGCCACTTCGGCCGCGAAGAGCCGGAATTCTCGTGGG AAGCAACCGACAAGGCGCTCGCGCTGGCCGAAGCGGCCGGCGTGGAGCCGACGGCACGCGTCGCGTAA
Upstream 100 bases:
>100_bases CACGCTGCCCGGTCCTGGTAATCCGCTAAAGCGTCGCCGCTTCAGGCCCAACGAAGCTGGCTACGTGAAACCAACCGTAA CCACACAGGAGCCTGAAAAA
Downstream 100 bases:
>100_bases GCGTCGTTCGCCTGAAATGAAAAACCCCGGCCTAGCCGGGGTTTTTTATGGGTGTCGATCGTCGCGGCAACGGCGGCGAT CGGTGCGGGCCATGCCCGCC
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MANDYLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYD NTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDNLDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGR LQWLRPDAKSQVTVRYVDGKPDSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQ GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFG TGRVSDAVITKLVREHFDLRPKGIIKMLDLLRPIYEKTAAYGHFGREEPEFSWEATDKALALAEAAGVEPTARVA
Sequences:
>Translated_395_residues MANDYLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYD NTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDNLDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGR LQWLRPDAKSQVTVRYVDGKPDSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQ GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFG TGRVSDAVITKLVREHFDLRPKGIIKMLDLLRPIYEKTAAYGHFGREEPEFSWEATDKALALAEAAGVEPTARVA >Mature_394_residues ANDYLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDN TDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDNLDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRL QWLRPDAKSQVTVRYVDGKPDSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQG DCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGT GRVSDAVITKLVREHFDLRPKGIIKMLDLLRPIYEKTAAYGHFGREEPEFSWEATDKALALAEAAGVEPTARVA
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI4557737, Length=378, Percent_Identity=58.2010582010582, Blast_Score=427, Evalue=1e-119, Organism=Homo sapiens, GI5174529, Length=378, Percent_Identity=56.3492063492063, Blast_Score=417, Evalue=1e-117, Organism=Escherichia coli, GI1789311, Length=385, Percent_Identity=69.8701298701299, Blast_Score=536, Evalue=1e-154, Organism=Caenorhabditis elegans, GI25145633, Length=380, Percent_Identity=58.6842105263158, Blast_Score=429, Evalue=1e-121, Organism=Caenorhabditis elegans, GI17538494, Length=376, Percent_Identity=58.5106382978723, Blast_Score=426, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17538498, Length=376, Percent_Identity=58.7765957446808, Blast_Score=426, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17551082, Length=389, Percent_Identity=55.7840616966581, Blast_Score=418, Evalue=1e-117, Organism=Caenorhabditis elegans, GI32565905, Length=376, Percent_Identity=53.1914893617021, Blast_Score=360, Evalue=1e-100, Organism=Caenorhabditis elegans, GI25145635, Length=332, Percent_Identity=57.2289156626506, Blast_Score=360, Evalue=1e-100, Organism=Caenorhabditis elegans, GI32565911, Length=328, Percent_Identity=57.6219512195122, Blast_Score=359, Evalue=1e-99, Organism=Caenorhabditis elegans, GI32565903, Length=301, Percent_Identity=57.8073089700997, Blast_Score=324, Evalue=4e-89, Organism=Caenorhabditis elegans, GI32565909, Length=84, Percent_Identity=57.1428571428571, Blast_Score=107, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6320710, Length=379, Percent_Identity=58.8390501319261, Blast_Score=428, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6323209, Length=378, Percent_Identity=58.994708994709, Blast_Score=425, Evalue=1e-120, Organism=Drosophila melanogaster, GI45552159, Length=376, Percent_Identity=55.0531914893617, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580529, Length=376, Percent_Identity=55.0531914893617, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580537, Length=376, Percent_Identity=55.0531914893617, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580533, Length=376, Percent_Identity=55.0531914893617, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580535, Length=376, Percent_Identity=55.0531914893617, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580531, Length=376, Percent_Identity=55.0531914893617, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580527, Length=374, Percent_Identity=54.5454545454545, Blast_Score=387, Evalue=1e-108, Organism=Drosophila melanogaster, GI24580525, Length=374, Percent_Identity=54.5454545454545, Blast_Score=387, Evalue=1e-108, Organism=Drosophila melanogaster, GI24580541, Length=375, Percent_Identity=52.2666666666667, Blast_Score=364, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580539, Length=119, Percent_Identity=54.6218487394958, Blast_Score=134, Evalue=1e-31,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 42709; Mature: 42578
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANDYLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITT CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE TANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDNLDQGA ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCC GDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLQWLRPDAKSQVTVRYVDGK CCCCEEEEEECCCCCCCEECHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCC PDSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQ CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCEEEECCC GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALI CCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE QVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLRPIYEKTAA EEEHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YGHFGREEPEFSWEATDKALALAEAAGVEPTARVA HCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ANDYLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITT CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE TANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDNLDQGA ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCC GDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLQWLRPDAKSQVTVRYVDGK CCCCEEEEEECCCCCCCEECHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCC PDSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQ CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCEEEECCC GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALI CCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE QVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLRPIYEKTAA EEEHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YGHFGREEPEFSWEATDKALALAEAAGVEPTARVA HCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA