| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116691089
Identifier: 116691089
GI number: 116691089
Start: 3386220
End: 3386789
Strand: Direct
Name: 116691089
Synonym: Bcen2424_3071
Alternate gene names: NA
Gene position: 3386220-3386789 (Clockwise)
Preceding gene: 116691087
Following gene: 116691090
Centisome position: 97.2
GC content: 69.3
Gene sequence:
>570_bases ATGCGCTTCGCGCGATGCACCGGCCACGAGAAGCCGATTCGTCGCGAAACGGGAGGAATGACGATGCAGCGCAAGATCCT GCAGGCCGCATGTCGACCAAGTGATCCGGAAGTCACGCGCGCGGCCCGCATTTCATTTCAAACGGCGGCCCGCGCGACGA TCCACGGCGCGATGCGCGCAGTCGGTCGAAATCGAACGGCACGTGTCATCCCCGACCGTTTGGATGGTGTGTCGGCGCCG TGGCACGATGCGCGGCGACCCGCCGTCGCGGCTATGTCGCGCTGCGCTGCCGCGGTGCGCCGGCCGACGCGCGCAAGACG GCATCGCGTGCCTGCTCGTCACCGTATCGGATCGTGCGCGCCTGCCGTGCGGCATGACTTTCGGACACGGACACCGTCGC GCGGATACGACGCCTGCCGCGCGCGGCAACCGGTTTTCGAACACCCGTCGCATCCGGCCCCGTGCCGGGCGACATGCATC ACCCGATCCGCGTCGCCGCGCTCGCCGAGCGTGCGCGTGCGGCGTGACGGCCGGCCGATCAGCCAGGCCCAACTGGAGGA GACGACATGA
Upstream 100 bases:
>100_bases TTGTGTTCGGGCATTGTAGGAACGGCTGTCCCGTGCGCGGCGCGCCGATTCGAGAGCGATTCCTCTAAACGCCCGCGTGA ACTAAATTTAAGATGTATCG
Downstream 100 bases:
>100_bases AGAACGACCTGCCCGAACTGGCCCCGCAAGCATTGCCATCGGTCGATGCGCTGACGTCGCTGCTGCACGACCAGCGTGCG GCGTACCTGCGCGCACCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRFARCTGHEKPIRRETGGMTMQRKILQAACRPSDPEVTRAARISFQTAARATIHGAMRAVGRNRTARVIPDRLDGVSAP WHDARRPAVAAMSRCAAAVRRPTRARRHRVPARHRIGSCAPAVRHDFRTRTPSRGYDACRARQPVFEHPSHPAPCRATCI TRSASPRSPSVRVRRDGRPISQAQLEETT
Sequences:
>Translated_189_residues MRFARCTGHEKPIRRETGGMTMQRKILQAACRPSDPEVTRAARISFQTAARATIHGAMRAVGRNRTARVIPDRLDGVSAP WHDARRPAVAAMSRCAAAVRRPTRARRHRVPARHRIGSCAPAVRHDFRTRTPSRGYDACRARQPVFEHPSHPAPCRATCI TRSASPRSPSVRVRRDGRPISQAQLEETT >Mature_189_residues MRFARCTGHEKPIRRETGGMTMQRKILQAACRPSDPEVTRAARISFQTAARATIHGAMRAVGRNRTARVIPDRLDGVSAP WHDARRPAVAAMSRCAAAVRRPTRARRHRVPARHRIGSCAPAVRHDFRTRTPSRGYDACRARQPVFEHPSHPAPCRATCI TRSASPRSPSVRVRRDGRPISQAQLEETT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21107; Mature: 21107
Theoretical pI: Translated: 12.36; Mature: 12.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFARCTGHEKPIRRETGGMTMQRKILQAACRPSDPEVTRAARISFQTAARATIHGAMRA CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VGRNRTARVIPDRLDGVSAPWHDARRPAVAAMSRCAAAVRRPTRARRHRVPARHRIGSCA HCCCCCEEECCHHHCCCCCCCHHHCCHHHHHHHHHHHHHHCHHHHHHHCCCHHHHCCCCC PAVRHDFRTRTPSRGYDACRARQPVFEHPSHPAPCRATCITRSASPRSPSVRVRRDGRPI HHHHHHHHCCCCCCCCHHHHHCCCHHCCCCCCCCCHHHEEECCCCCCCCCEEEECCCCCC SQAQLEETT CHHHHCCCC >Mature Secondary Structure MRFARCTGHEKPIRRETGGMTMQRKILQAACRPSDPEVTRAARISFQTAARATIHGAMRA CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VGRNRTARVIPDRLDGVSAPWHDARRPAVAAMSRCAAAVRRPTRARRHRVPARHRIGSCA HCCCCCEEECCHHHCCCCCCCHHHCCHHHHHHHHHHHHHHCHHHHHHHCCCHHHHCCCCC PAVRHDFRTRTPSRGYDACRARQPVFEHPSHPAPCRATCITRSASPRSPSVRVRRDGRPI HHHHHHHHCCCCCCCCHHHHHCCCHHCCCCCCCCCHHHEEECCCCCCCCCEEEECCCCCC SQAQLEETT CHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA