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The map label for this gene is fliF [H]

Identifier: 116691082

GI number: 116691082

Start: 3377572

End: 3379335

Strand: Direct

Name: fliF [H]

Synonym: Bcen2424_3064

Alternate gene names: 116691082

Gene position: 3377572-3379335 (Clockwise)

Preceding gene: 116691075

Following gene: 116691083

Centisome position: 96.95

GC content: 69.95

Gene sequence:

>1764_bases
ATGGATTCGCAGGCCAACTCGCTGATCAACCCAGACGCCCGCGCGGGCCTCAGCCCGGCGCCCGGCGCCGCCGCGGCCGC
CGCGTTGCCGGGCGCGGGCGGCGCAGGCGCGGACTTCGGGCTGGGCGGCTTCGCCGAACGCATTCCCGGCATCTCGCGGA
TGAAGGGCAACCCGAAGCTGCCGTTCGTGATCGCCGTCGCGTTCGCGATCGCCGCGATCACCGCGCTCGTGCTGTGGAGC
CGGGCGCCCGACTACCGCGTGCTGTACAGCAACCTGTCGGACCGCGACGGCGGCGCGATCATCGCCGCGCTCCAGCAGGC
AAACGTTCCCTACAAGTTCGCCGATGCCGGCGGCGCGATCCTGGTGCCGTCGGGCCAGGTGCACGAAACGCGCCTGAAGC
TCGCCGCGATGGGGCTGCCGAAAGGCGGCTCGGTCGGCTTCGAGCTGATGGACAACCAGAAATTCGGCATCAGCCAGTTC
GCCGAGCAGATCAACTACCAGCGCGCGCTCGAAGGCGAGCTGCAGCGCACCATCGAATCGATCAACGCCGTGCGCGGCGC
GCGCGTGCATCTCGCGATCCCGAAGCCGTCGGTGTTCGTGCGCGACAAGGAAGCGCCGAGCGCGTCGGTGTTCGTCGACC
TCTACCCGGGCCGCGTGCTCGACGAGGGCCAGGTGCAGGCGATCACGCGGATGGTGTCGTCCGGCGTGCCCGACATGCCG
GCCAAGAACGTGACGATCGTCGACCAGGACGGCAACCTGCTGACCCAGACCGCGTCCGCGTCCGGCCTCGACGCGAGCCA
GCTCAAGTACGTGCAGCAGGTCGAGCACAACACCCAGAAGCGCATCGACGCGATCCTCGCGCCGATCTTCGGCGCCGGCA
ACGCGCGCTCGCAGGTCAGCGCGGATCTCGACTTCTCGAAGATCGAGCAGACGTCGGAAAGCTACGGCCCGAACGGCACG
CCGCAGCAGGCCGCGATCCGCAGCCAGCAGACCAGCAGCGCGACCGAACTCGCGCAGGGCGGCGCGTCGGGCGTGCCGGG
GGCGCTGTCGAACACGCCGCCGCAGCCGGCCTCCGCGCCGATCGTCGCCGGCAACGGCCAGAACGGGCCGCAGACCACGC
CGGTCAGCGACCGCAAGGACCAGACGACCAACTACGAGCTCGACAAGACGATCCGCCATACCGAACAGCCGATGGGCAGC
GTGAAGCGGCTGTCGGTCGCGGTCGTCGTCAACTACCAGCCGGTCGCCGACGCGAAGGGCCACGTGACGATGCAGCCGCT
GCCGCCCGCGAAGCTCGCGCAGGTCGAACAGCTCGTGAAGGACGCGATGGGCTACGACGCGAAGCGCGGCGACTCGGTAA
ACGTCGTGAACAGCGCGTTCTCGACCGTGAGCGACCCGTACGCCGACCTGCCGTGGTGGCGCCAGCCCGACATGATCGCG
ATGGCGAAGGAAGCCGCGAAGTGGCTCGGCATCGCGGCGGCCGCGGCGGCGCTCTACTTCATGTTCGTGCGCCCGGCGAT
GCGCCGCGCGTTCCCGCCGCCCGAGCCGGCCGCGCCGGCGCTCGCGGCGCCGGAAGACACGGTCGCGCTCGACGGCCTGC
CCGCGCCGGAAAAGGCCGCGGAAGAAGCCGATCCGCTGCTGCTCGGCTTCGAGAACGAGAAGAACCGCTACGAACGCAAC
CTCGACTACGCGCGCACGATCGCCCGCCAGGATCCGAAGATCGTCGCCACCGTCGTGAAGAACTGGGTGTCCGATGAACG
CTGA

Upstream 100 bases:

>100_bases
TCGATCGGAGTGCGCCGCCGGTCACGATAATCGCATCGTGTCATTGTCCGCCCGCTCGTCCGAGCGAGCTCAGTCGTCCC
GCTCCGGAGAAACTCGACGC

Downstream 100 bases:

>100_bases
AGGCTTGACCAAGAGCGCGCTGCTGCTGATGTCGATCGGCGAGGAAGAGGCCGCGCAGGTATTCAAGTTCCTCGCGCCGC
GCGAGGTCCAGAAGATCGGC

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MDSQANSLINPDARAGLSPAPGAAAAAALPGAGGAGADFGLGGFAERIPGISRMKGNPKLPFVIAVAFAIAAITALVLWS
RAPDYRVLYSNLSDRDGGAIIAALQQANVPYKFADAGGAILVPSGQVHETRLKLAAMGLPKGGSVGFELMDNQKFGISQF
AEQINYQRALEGELQRTIESINAVRGARVHLAIPKPSVFVRDKEAPSASVFVDLYPGRVLDEGQVQAITRMVSSGVPDMP
AKNVTIVDQDGNLLTQTASASGLDASQLKYVQQVEHNTQKRIDAILAPIFGAGNARSQVSADLDFSKIEQTSESYGPNGT
PQQAAIRSQQTSSATELAQGGASGVPGALSNTPPQPASAPIVAGNGQNGPQTTPVSDRKDQTTNYELDKTIRHTEQPMGS
VKRLSVAVVVNYQPVADAKGHVTMQPLPPAKLAQVEQLVKDAMGYDAKRGDSVNVVNSAFSTVSDPYADLPWWRQPDMIA
MAKEAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEPAAPALAAPEDTVALDGLPAPEKAAEEADPLLLGFENEKNRYERN
LDYARTIARQDPKIVATVVKNWVSDER

Sequences:

>Translated_587_residues
MDSQANSLINPDARAGLSPAPGAAAAAALPGAGGAGADFGLGGFAERIPGISRMKGNPKLPFVIAVAFAIAAITALVLWS
RAPDYRVLYSNLSDRDGGAIIAALQQANVPYKFADAGGAILVPSGQVHETRLKLAAMGLPKGGSVGFELMDNQKFGISQF
AEQINYQRALEGELQRTIESINAVRGARVHLAIPKPSVFVRDKEAPSASVFVDLYPGRVLDEGQVQAITRMVSSGVPDMP
AKNVTIVDQDGNLLTQTASASGLDASQLKYVQQVEHNTQKRIDAILAPIFGAGNARSQVSADLDFSKIEQTSESYGPNGT
PQQAAIRSQQTSSATELAQGGASGVPGALSNTPPQPASAPIVAGNGQNGPQTTPVSDRKDQTTNYELDKTIRHTEQPMGS
VKRLSVAVVVNYQPVADAKGHVTMQPLPPAKLAQVEQLVKDAMGYDAKRGDSVNVVNSAFSTVSDPYADLPWWRQPDMIA
MAKEAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEPAAPALAAPEDTVALDGLPAPEKAAEEADPLLLGFENEKNRYERN
LDYARTIARQDPKIVATVVKNWVSDER
>Mature_587_residues
MDSQANSLINPDARAGLSPAPGAAAAAALPGAGGAGADFGLGGFAERIPGISRMKGNPKLPFVIAVAFAIAAITALVLWS
RAPDYRVLYSNLSDRDGGAIIAALQQANVPYKFADAGGAILVPSGQVHETRLKLAAMGLPKGGSVGFELMDNQKFGISQF
AEQINYQRALEGELQRTIESINAVRGARVHLAIPKPSVFVRDKEAPSASVFVDLYPGRVLDEGQVQAITRMVSSGVPDMP
AKNVTIVDQDGNLLTQTASASGLDASQLKYVQQVEHNTQKRIDAILAPIFGAGNARSQVSADLDFSKIEQTSESYGPNGT
PQQAAIRSQQTSSATELAQGGASGVPGALSNTPPQPASAPIVAGNGQNGPQTTPVSDRKDQTTNYELDKTIRHTEQPMGS
VKRLSVAVVVNYQPVADAKGHVTMQPLPPAKLAQVEQLVKDAMGYDAKRGDSVNVVNSAFSTVSDPYADLPWWRQPDMIA
MAKEAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEPAAPALAAPEDTVALDGLPAPEKAAEEADPLLLGFENEKNRYERN
LDYARTIARQDPKIVATVVKNWVSDER

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=549, Percent_Identity=48.0874316939891, Blast_Score=491, Evalue=1e-140,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 62117; Mature: 62117

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSQANSLINPDARAGLSPAPGAAAAAALPGAGGAGADFGLGGFAERIPGISRMKGNPKL
CCCCCCCCCCCHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHCCCCCCC
PFVIAVAFAIAAITALVLWSRAPDYRVLYSNLSDRDGGAIIAALQQANVPYKFADAGGAI
CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEHHHCCCCEEEECCCCEE
LVPSGQVHETRLKLAAMGLPKGGSVGFELMDNQKFGISQFAEQINYQRALEGELQRTIES
EECCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
INAVRGARVHLAIPKPSVFVRDKEAPSASVFVDLYPGRVLDEGQVQAITRMVSSGVPDMP
HHHHCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCC
AKNVTIVDQDGNLLTQTASASGLDASQLKYVQQVEHNTQKRIDAILAPIFGAGNARSQVS
CCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC
ADLDFSKIEQTSESYGPNGTPQQAAIRSQQTSSATELAQGGASGVPGALSNTPPQPASAP
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
IVAGNGQNGPQTTPVSDRKDQTTNYELDKTIRHTEQPMGSVKRLSVAVVVNYQPVADAKG
EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCC
HVTMQPLPPAKLAQVEQLVKDAMGYDAKRGDSVNVVNSAFSTVSDPYADLPWWRQPDMIA
CEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHH
MAKEAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEPAAPALAAPEDTVALDGLPAPEKAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCHHHH
EEADPLLLGFENEKNRYERNLDYARTIARQDPKIVATVVKNWVSDER
HCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDSQANSLINPDARAGLSPAPGAAAAAALPGAGGAGADFGLGGFAERIPGISRMKGNPKL
CCCCCCCCCCCHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHCCCCCCC
PFVIAVAFAIAAITALVLWSRAPDYRVLYSNLSDRDGGAIIAALQQANVPYKFADAGGAI
CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEHHHCCCCEEEECCCCEE
LVPSGQVHETRLKLAAMGLPKGGSVGFELMDNQKFGISQFAEQINYQRALEGELQRTIES
EECCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
INAVRGARVHLAIPKPSVFVRDKEAPSASVFVDLYPGRVLDEGQVQAITRMVSSGVPDMP
HHHHCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCC
AKNVTIVDQDGNLLTQTASASGLDASQLKYVQQVEHNTQKRIDAILAPIFGAGNARSQVS
CCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC
ADLDFSKIEQTSESYGPNGTPQQAAIRSQQTSSATELAQGGASGVPGALSNTPPQPASAP
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
IVAGNGQNGPQTTPVSDRKDQTTNYELDKTIRHTEQPMGSVKRLSVAVVVNYQPVADAKG
EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCC
HVTMQPLPPAKLAQVEQLVKDAMGYDAKRGDSVNVVNSAFSTVSDPYADLPWWRQPDMIA
CEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHH
MAKEAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEPAAPALAAPEDTVALDGLPAPEKAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCHHHH
EEADPLLLGFENEKNRYERNLDYARTIARQDPKIVATVVKNWVSDER
HCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 1551848; 8224881 [H]