| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116691068
Identifier: 116691068
GI number: 116691068
Start: 3365052
End: 3365780
Strand: Direct
Name: 116691068
Synonym: Bcen2424_3050
Alternate gene names: NA
Gene position: 3365052-3365780 (Clockwise)
Preceding gene: 116691057
Following gene: 116691069
Centisome position: 96.59
GC content: 68.72
Gene sequence:
>729_bases ATGTCCGTCCCCGCTGCTTCCCCGCGCGTCGACTCCGACGCGGTCCGTTCCGTCGATGCCGTCGACGCCGCGCTCAAGTC ACGCCATTCAGTCCGGGCGTTCCTGCCGACGCCCGTGCCGCGCGCCACGATCGAGGCGATCCTCGAAGCCGCGAGCCGCG CGCCGTCGGGCACCAACATCCAGCCGTGGCGCGTGTACGTCGCCACGGGCACCACGCGCGATGCACTCGCCGCCGCGCTC ACCGCGGCCTATGACGATCCCGCGCGCGACGAGAAATACGTCGCCGAATACGACTACTACCCGCGCGAATGGGTGTCGCC GTATGTCGACCGGCGCCGCAAGGTCGGCTGGGACCTGTACGGCCTGTTGAACATCGGCCGCGACGAGAAGGGGCGCATGC ATGCGCAGCACGCGCGCAATTTCCGTTTCTTCGATGCGCCGGTCGCATTGTTCTTCACGCTCGACCGCGTGATGACGTCA GGGGCCTGGCTCGACTGCGGGATGTTCCTGCAGGGCGTGATGACGGCCGCGCGCGCCCGCGGCCTCGACACCTGCCCGCA GGCCGCGTTCGTGCCGTTTCACCGGATCGTCGCCGAACACCTCGACATTCCCGCCAACGAGCAGCTCGTCTGCGGCATGT CGCTCGGCCATGCGGACCCCGACGCGATCGAGAACCGCCTCGTCACCGAGCGCGCGAGTGTCGCCGAGTTCACGCGCTTT TTCGCTTGA
Upstream 100 bases:
>100_bases GACAGTTCACGATGCTCGCGCGGGGCTTCCCGATCGCGCCCGCGCGCCGCGCACACGCTGCTGTCCCGCACTTCGCCTGA CGCCTCCCGAAGGGTTGCCG
Downstream 100 bases:
>100_bases AAACGCATGACGCGGCCTTACCTGTCGAGCAGGACCGCATCGTGCTGCGAACCTGTCGCGGCGCGTCCTGTCACATCACG ACCGAAATCGATCGGGCGTA
Product: nitroreductase
Products: NA
Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; NfnB Protein; P-Nitrobenzoate Reductase; NADH Dehydrogenase; Oxidoreductase Protein; Nitroreductase Family; Nitrobenzene Nitroreductase; Nitrobenzoate Nitroreductase; Nitrobenzoate Reductase
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MSVPAASPRVDSDAVRSVDAVDAALKSRHSVRAFLPTPVPRATIEAILEAASRAPSGTNIQPWRVYVATGTTRDALAAAL TAAYDDPARDEKYVAEYDYYPREWVSPYVDRRRKVGWDLYGLLNIGRDEKGRMHAQHARNFRFFDAPVALFFTLDRVMTS GAWLDCGMFLQGVMTAARARGLDTCPQAAFVPFHRIVAEHLDIPANEQLVCGMSLGHADPDAIENRLVTERASVAEFTRF FA
Sequences:
>Translated_242_residues MSVPAASPRVDSDAVRSVDAVDAALKSRHSVRAFLPTPVPRATIEAILEAASRAPSGTNIQPWRVYVATGTTRDALAAAL TAAYDDPARDEKYVAEYDYYPREWVSPYVDRRRKVGWDLYGLLNIGRDEKGRMHAQHARNFRFFDAPVALFFTLDRVMTS GAWLDCGMFLQGVMTAARARGLDTCPQAAFVPFHRIVAEHLDIPANEQLVCGMSLGHADPDAIENRLVTERASVAEFTRF FA >Mature_241_residues SVPAASPRVDSDAVRSVDAVDAALKSRHSVRAFLPTPVPRATIEAILEAASRAPSGTNIQPWRVYVATGTTRDALAAALT AAYDDPARDEKYVAEYDYYPREWVSPYVDRRRKVGWDLYGLLNIGRDEKGRMHAQHARNFRFFDAPVALFFTLDRVMTSG AWLDCGMFLQGVMTAARARGLDTCPQAAFVPFHRIVAEHLDIPANEQLVCGMSLGHADPDAIENRLVTERASVAEFTRFF A
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26833; Mature: 26701
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPAASPRVDSDAVRSVDAVDAALKSRHSVRAFLPTPVPRATIEAILEAASRAPSGTNI CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCC QPWRVYVATGTTRDALAAALTAAYDDPARDEKYVAEYDYYPREWVSPYVDRRRKVGWDLY CCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEHHCCCCCHHHHHHHHHHHHHCCCHHH GLLNIGRDEKGRMHAQHARNFRFFDAPVALFFTLDRVMTSGAWLDCGMFLQGVMTAARAR HHHCCCCCCCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC GLDTCPQAAFVPFHRIVAEHLDIPANEQLVCGMSLGHADPDAIENRLVTERASVAEFTRF CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH FA CC >Mature Secondary Structure SVPAASPRVDSDAVRSVDAVDAALKSRHSVRAFLPTPVPRATIEAILEAASRAPSGTNI CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCC QPWRVYVATGTTRDALAAALTAAYDDPARDEKYVAEYDYYPREWVSPYVDRRRKVGWDLY CCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEHHCCCCCHHHHHHHHHHHHHCCCHHH GLLNIGRDEKGRMHAQHARNFRFFDAPVALFFTLDRVMTSGAWLDCGMFLQGVMTAARAR HHHCCCCCCCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC GLDTCPQAAFVPFHRIVAEHLDIPANEQLVCGMSLGHADPDAIENRLVTERASVAEFTRF CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH FA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA