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The map label for this gene is hip [H]

Identifier: 116691065

GI number: 116691065

Start: 3362061

End: 3362372

Strand: Reverse

Name: hip [H]

Synonym: Bcen2424_3047

Alternate gene names: 116691065

Gene position: 3362372-3362061 (Counterclockwise)

Preceding gene: 116691066

Following gene: 116691064

Centisome position: 96.51

GC content: 65.38

Gene sequence:

>312_bases
ATGAAAACATCCCGTCGGAGTTTCCTGATCACGAGCATTGGTGCGGTGTCCGCGCTGGCGCTGTCGCGCGAAGCGCTGGC
CGATGCGCCGATGCTGCCGGAAACGGACCCGACCGCGGTGGCGCTCGGCTACAAGGCCGATGCCACGAAGGTCGACAAGA
CGAAGTACCCGAAATACGCAGCGGGCCAGGATTGCGCGGCCTGCATGCTGTACCAGGGCAAGAAGGGCTCGGCTTCGGGC
CCGTGCGGCGCGTTCCCCGGCAAGCAGGTGTCGGCGAAGGGCTGGTGCAGCGCTTTCTCGAAGATGGGTTGA

Upstream 100 bases:

>100_bases
CCGGCATTTCGGCGCGCACATTTATTCGCTCGGGAGTTATTCTGTCGAACGGCCGTCGCCAGAACGGCTTTCAAACCGAT
AACGTTGGAGCGAGTCCCCC

Downstream 100 bases:

>100_bases
GGCCCGTGCGGCATCGTGCGATGCCGCAATGTGGCGAAAACCGCAACACGCTCGCTGTCGTTCGATGGCGGGCGTTTTTT
ATTGCTTGAAAACGGTTCCG

Product: high potential iron-sulfur protein

Products: NA

Alternate protein names: HiPIP [H]

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MKTSRRSFLITSIGAVSALALSREALADAPMLPETDPTAVALGYKADATKVDKTKYPKYAAGQDCAACMLYQGKKGSASG
PCGAFPGKQVSAKGWCSAFSKMG

Sequences:

>Translated_103_residues
MKTSRRSFLITSIGAVSALALSREALADAPMLPETDPTAVALGYKADATKVDKTKYPKYAAGQDCAACMLYQGKKGSASG
PCGAFPGKQVSAKGWCSAFSKMG
>Mature_103_residues
MKTSRRSFLITSIGAVSALALSREALADAPMLPETDPTAVALGYKADATKVDKTKYPKYAAGQDCAACMLYQGKKGSASG
PCGAFPGKQVSAKGWCSAFSKMG

Specific function: Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the high-potential iron-sulfur protein (HiPIP) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000170
- InterPro:   IPR006311 [H]

Pfam domain/function: PF01355 HIPIP [H]

EC number: NA

Molecular weight: Translated: 10657; Mature: 10657

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00596 HIPIP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSRRSFLITSIGAVSALALSREALADAPMLPETDPTAVALGYKADATKVDKTKYPKYA
CCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
AGQDCAACMLYQGKKGSASGPCGAFPGKQVSAKGWCSAFSKMG
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKTSRRSFLITSIGAVSALALSREALADAPMLPETDPTAVALGYKADATKVDKTKYPKYA
CCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
AGQDCAACMLYQGKKGSASGPCGAFPGKQVSAKGWCSAFSKMG
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]