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The map label for this gene is ybgL [C]

Identifier: 116691057

GI number: 116691057

Start: 3352025

End: 3352849

Strand: Direct

Name: ybgL [C]

Synonym: Bcen2424_3039

Alternate gene names: 116691057

Gene position: 3352025-3352849 (Clockwise)

Preceding gene: 116691056

Following gene: 116691068

Centisome position: 96.21

GC content: 69.33

Gene sequence:

>825_bases
GTGACAATGGCGGAAAGCGGTAGCGAAGGACGCGCCACGCAACCAGTGGACGAGGAACATATGGAAATCGATCTGAATGC
CGATCTCGGCGAAGGATGCGGATCGGACGAGGCGCTGCTCGACCTCGTCACGTCGGCGAACATCGCATGCGGATGGCATG
CAGGCGGCGCGAACGCGATGCGCGACTGCGTGCGCTGGGCCGTGCAGAAAGGCGTGTCGATCGGCGCGCATCCGAGCTTC
CACGATCCGGAGAATTTCGGCCGCAAGGAAATGCAGCTGCCGCCCGGCGACATCTACGCGGGCGTGCTGTACCAGCTCGG
TGCGCTGTCGGCGATCGCGCAGGCCGAGGGCGGCCGCATCGTGCACGTGAAACCGCACGGAGCGCTGTACAACCAGGCCG
CGCGCGACCCGCTGATCGCCGACGCGGTGGTGTCCGCGATCCACGATTTCGATCCGTCGCTCGCGGTGTTCGGGCTCGCG
AACAGCGTGTTCATCGCGGCCGCGCGGCAGGCGGGGCTCGCGGCGGTGGAGGAAGTGTTCGCCGATCGCGGCTACCGCGC
GGACGGCTCGCTGGTGCCGCGCAGCCTGCCCGGCGCGTTGATCGACGATGAAGATGCGGTGCTCGCGCGCACGCTCGACA
TGGTGCGCAACCGGCAGGTGCGCGCGCTGAGCGGCGAATGGGTGCCGCTCAATGCGCAGACCGTCTGCCTGCATGGCGAC
GGGCCGCATGCGCTGGCGTTCGCGAAGCGAATCCGCGCGGCGCTCGAGGCCGCCGGCGTCGACGTCGTGGCGCCCGGCGC
GCTGCAGGCCGACGAAGGCGCGTAA

Upstream 100 bases:

>100_bases
CACGCGCCGCCCTCGTCGCGGAACGGGCGTACCTGCGGCAGATCGACGTCGCGATCGAGATGCGCGAGGAAGCGCGCCGC
CGCGCCCAATCGCGCGCGGC

Downstream 100 bases:

>100_bases
CGCAGCAGTCGGCGCATGGCCCGCGCGCCGCACGTTTTCGTCGCACCAAAGAAAAAAGCGCCCTCGTGGCGCTTTTCCGT
TGGTGCAATCGGTGCGGCTT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MTMAESGSEGRATQPVDEEHMEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGANAMRDCVRWAVQKGVSIGAHPSF
HDPENFGRKEMQLPPGDIYAGVLYQLGALSAIAQAEGGRIVHVKPHGALYNQAARDPLIADAVVSAIHDFDPSLAVFGLA
NSVFIAAARQAGLAAVEEVFADRGYRADGSLVPRSLPGALIDDEDAVLARTLDMVRNRQVRALSGEWVPLNAQTVCLHGD
GPHALAFAKRIRAALEAAGVDVVAPGALQADEGA

Sequences:

>Translated_274_residues
MTMAESGSEGRATQPVDEEHMEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGANAMRDCVRWAVQKGVSIGAHPSF
HDPENFGRKEMQLPPGDIYAGVLYQLGALSAIAQAEGGRIVHVKPHGALYNQAARDPLIADAVVSAIHDFDPSLAVFGLA
NSVFIAAARQAGLAAVEEVFADRGYRADGSLVPRSLPGALIDDEDAVLARTLDMVRNRQVRALSGEWVPLNAQTVCLHGD
GPHALAFAKRIRAALEAAGVDVVAPGALQADEGA
>Mature_273_residues
TMAESGSEGRATQPVDEEHMEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGANAMRDCVRWAVQKGVSIGAHPSFH
DPENFGRKEMQLPPGDIYAGVLYQLGALSAIAQAEGGRIVHVKPHGALYNQAARDPLIADAVVSAIHDFDPSLAVFGLAN
SVFIAAARQAGLAAVEEVFADRGYRADGSLVPRSLPGALIDDEDAVLARTLDMVRNRQVRALSGEWVPLNAQTVCLHGDG
PHALAFAKRIRAALEAAGVDVVAPGALQADEGA

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=244, Percent_Identity=61.4754098360656, Blast_Score=312, Evalue=2e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 28645; Mature: 28514

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMAESGSEGRATQPVDEEHMEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGANAM
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHH
RDCVRWAVQKGVSIGAHPSFHDPENFGRKEMQLPPGDIYAGVLYQLGALSAIAQAEGGRI
HHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
VHVKPHGALYNQAARDPLIADAVVSAIHDFDPSLAVFGLANSVFIAAARQAGLAAVEEVF
EEECCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
ADRGYRADGSLVPRSLPGALIDDEDAVLARTLDMVRNRQVRALSGEWVPLNAQTVCLHGD
HHCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCEEEECCCEEECCCEEEEEECC
GPHALAFAKRIRAALEAAGVDVVAPGALQADEGA
CCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC
>Mature Secondary Structure 
TMAESGSEGRATQPVDEEHMEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGANAM
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHH
RDCVRWAVQKGVSIGAHPSFHDPENFGRKEMQLPPGDIYAGVLYQLGALSAIAQAEGGRI
HHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
VHVKPHGALYNQAARDPLIADAVVSAIHDFDPSLAVFGLANSVFIAAARQAGLAAVEEVF
EEECCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
ADRGYRADGSLVPRSLPGALIDDEDAVLARTLDMVRNRQVRALSGEWVPLNAQTVCLHGD
HHCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCEEEECCCEEECCCEEEEEECC
GPHALAFAKRIRAALEAAGVDVVAPGALQADEGA
CCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA