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The map label for this gene is ybjT [C]

Identifier: 116691051

GI number: 116691051

Start: 3345992

End: 3346951

Strand: Reverse

Name: ybjT [C]

Synonym: Bcen2424_3033

Alternate gene names: 116691051

Gene position: 3346951-3345992 (Counterclockwise)

Preceding gene: 116691052

Following gene: 116691050

Centisome position: 96.07

GC content: 71.46

Gene sequence:

>960_bases
ATGGATCGCCAGACCGTCGCGCTGCTGGGCGGCACCGGCTTCATCGGCAGCCGGCTCGTCAATGCGCTGATCGATGCCGG
CAAGCACGTGCGGATCGGTACGCGGCGGCGCGACCACGCGCGCCACCTGCAGATGCTGCCGGTCGACATCGTCGAGCTCG
ACGCGCTCGATACGCGCACGCTCGCACGTTTCGTCGCCGGCGCGCACGCGGCGATCAACCTGGTCGGCGTGCTGCACGGC
GGCCGTGGCACGCCGTACGGGCCGGGCTTCGAGCGCGCGCACGTCGCGCTGCCGGTCGCGCTTGCGACCGCCTGCAGCGA
GGTCGGCGTGCGGCGCCTGCTGCACATGAGTGCGCTCGGTGCCGATTCGCGCGGCGCGAGCATGTACCAGCGCTCGAAGG
GCGACGGCGAAGCCGCGCTGCATGCGGTCGCGGCCACCGATTCGCTCGCGCTGACGATCTTCCGTCCGTCGGTCGTGTTC
GGCCCCGGCGACGCATTCCTCAACACGTTCGCGAACCTGCAGCGCACGGTGCCCGTGCTGCCGCTCGCGATGCCCGACGC
GCGCTTCCAGCCGGTATTCGTCGGCGACGTCGTGCGCGCGTTCGTCAACACCCTCGATCTCGTCGGCGCGCACGGCAAGA
CCTACGAGCTCGGCGGCCCGACCGTCTACACGCTCGAGCAACTGGTGCGCTACTGCGGCACGCTGGTCGGCCGGCAGGCA
CGCATCGTGCGGCTGCCCGACGTGCTTGCGCGGCTGCAGGCGAGCGTGTTCGAATGCCTGCCGGGCGAGCCGGTGCTCAC
GCGCGACAATCTCGCGACGATGTCGGTGCCGAACGTGCTGTCGGGGCCGCTCGCGCCGGAACTCGGGCTCTCGCCCGCGA
GTCTCGAAAGCATCGCGCCCGCGTATCTCGGCGAAGCGACCGGGCGCTCGCGGTTCGACTGGTTCCGCTCGCGTCGCTAG

Upstream 100 bases:

>100_bases
GGGCAAACCGCAGTCGTTGAAGAAACGTCTAGGCATGATCTCGCCCTGATACACGAACTGCCGCGCGAGACGCGGCAGTG
TTCTTTTTAGGACTCGAACA

Downstream 100 bases:

>100_bases
CCCGCGCGCGGGGCGCCGCCGGCCGACCTGTTTCTTTTCCTTTTTTCGCATTTTCCGGAACCCCGTCATGAAGCTCGTCA
TTGGAGACAAGAACTACTCG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NADH-Ubiquinone Oxidoreductase Subunit; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dtdp-Glucose-46-Dehydratase; NADH-Ubiquinone Oxireductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NADH-Ubiquinone Oxidoreductase Family Protein; NmrA Family Protein; Nucleoside-Diphosphate Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; Oxidoreductase Protein; Epimerase; Male Sterility-Like Protein; NDP-Sugar Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerases; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; Acyl-CoA Synthetase; Homolog NADH Dehydrogenase; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; LOW QUALITY PROTEIN Oxidoreductase

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MDRQTVALLGGTGFIGSRLVNALIDAGKHVRIGTRRRDHARHLQMLPVDIVELDALDTRTLARFVAGAHAAINLVGVLHG
GRGTPYGPGFERAHVALPVALATACSEVGVRRLLHMSALGADSRGASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVF
GPGDAFLNTFANLQRTVPVLPLAMPDARFQPVFVGDVVRAFVNTLDLVGAHGKTYELGGPTVYTLEQLVRYCGTLVGRQA
RIVRLPDVLARLQASVFECLPGEPVLTRDNLATMSVPNVLSGPLAPELGLSPASLESIAPAYLGEATGRSRFDWFRSRR

Sequences:

>Translated_319_residues
MDRQTVALLGGTGFIGSRLVNALIDAGKHVRIGTRRRDHARHLQMLPVDIVELDALDTRTLARFVAGAHAAINLVGVLHG
GRGTPYGPGFERAHVALPVALATACSEVGVRRLLHMSALGADSRGASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVF
GPGDAFLNTFANLQRTVPVLPLAMPDARFQPVFVGDVVRAFVNTLDLVGAHGKTYELGGPTVYTLEQLVRYCGTLVGRQA
RIVRLPDVLARLQASVFECLPGEPVLTRDNLATMSVPNVLSGPLAPELGLSPASLESIAPAYLGEATGRSRFDWFRSRR
>Mature_319_residues
MDRQTVALLGGTGFIGSRLVNALIDAGKHVRIGTRRRDHARHLQMLPVDIVELDALDTRTLARFVAGAHAAINLVGVLHG
GRGTPYGPGFERAHVALPVALATACSEVGVRRLLHMSALGADSRGASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVF
GPGDAFLNTFANLQRTVPVLPLAMPDARFQPVFVGDVVRAFVNTLDLVGAHGKTYELGGPTVYTLEQLVRYCGTLVGRQA
RIVRLPDVLARLQASVFECLPGEPVLTRDNLATMSVPNVLSGPLAPELGLSPASLESIAPAYLGEATGRSRFDWFRSRR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=300, Percent_Identity=32.3333333333333, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17556106, Length=284, Percent_Identity=26.7605633802817, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24667554, Length=323, Percent_Identity=26.3157894736842, Blast_Score=82, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34058; Mature: 34058

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRQTVALLGGTGFIGSRLVNALIDAGKHVRIGTRRRDHARHLQMLPVDIVELDALDTRT
CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCHHEEECCCCHHH
LARFVAGAHAAINLVGVLHGGRGTPYGPGFERAHVALPVALATACSEVGVRRLLHMSALG
HHHHHHHHHHHHEEEHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ADSRGASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDAFLNTFANLQRTVPVL
CCCCCHHHHHHCCCCCHHHHHHHEECCCEEEEEECCEEEECCCHHHHHHHHHHHHCCCEE
PLAMPDARFQPVFVGDVVRAFVNTLDLVGAHGKTYELGGPTVYTLEQLVRYCGTLVGRQA
EEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCC
RIVRLPDVLARLQASVFECLPGEPVLTRDNLATMSVPNVLSGPLAPELGLSPASLESIAP
EEEEHHHHHHHHHHHHHHHCCCCCEEECCCCCEECCCHHHCCCCCCCCCCCHHHHHHHHH
AYLGEATGRSRFDWFRSRR
HHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure
MDRQTVALLGGTGFIGSRLVNALIDAGKHVRIGTRRRDHARHLQMLPVDIVELDALDTRT
CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCHHEEECCCCHHH
LARFVAGAHAAINLVGVLHGGRGTPYGPGFERAHVALPVALATACSEVGVRRLLHMSALG
HHHHHHHHHHHHEEEHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ADSRGASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDAFLNTFANLQRTVPVL
CCCCCHHHHHHCCCCCHHHHHHHEECCCEEEEEECCEEEECCCHHHHHHHHHHHHCCCEE
PLAMPDARFQPVFVGDVVRAFVNTLDLVGAHGKTYELGGPTVYTLEQLVRYCGTLVGRQA
EEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCC
RIVRLPDVLARLQASVFECLPGEPVLTRDNLATMSVPNVLSGPLAPELGLSPASLESIAP
EEEEHHHHHHHHHHHHHHHCCCCCEEECCCCCEECCCHHHCCCCCCCCCCCHHHHHHHHH
AYLGEATGRSRFDWFRSRR
HHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA