| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116691003
Identifier: 116691003
GI number: 116691003
Start: 3297768
End: 3298235
Strand: Direct
Name: 116691003
Synonym: Bcen2424_2985
Alternate gene names: NA
Gene position: 3297768-3298235 (Clockwise)
Preceding gene: 116691002
Following gene: 116691004
Centisome position: 94.66
GC content: 73.29
Gene sequence:
>468_bases ATGGTAAGACTGTTTGGATGCGGATTGCTGGCGCTGACGTTCGCGTCGACAGGCTGGGCCGCCGAGCACTATGTCGAGGT CTGGAACCCGCCCGAGGCGCGGCAGCCGGCAGCCCGTACGCCGGATGCCCGTCTGCCGACTGCCCACCCGGGCGCCGACG CGCGCACCGGCAAGAGCGCGGAGAAGCACGCGAGCGCCACGCCGAAAGCAGCCGCGAAACCGCCCAAGCGCCGCGTCGCG CAGGCCGTGAAAGCGGGCTCGCACCGCCCGGCCGCCACCGCGACCGAAACCCGTGCCGCCCCGCGCCCCGTCGCGCAACC GGCGCCCGGGCGTCTCACGGTGATGCAGCCGGCCGCGCCGGACGCGACGCGCGCGCTCACCTTCTCCGACATCCCGCGTC AATACACGCCGGACGGCAACGTGCTGCAGGTCGGCACGCACGGCCGCTCCGCGGAGGTGACTCGATAA
Upstream 100 bases:
>100_bases TCGAGAAACACGGGCTCGAGGTGTTCTCCTGAGCCGGCTTCCCCGAATGCCCCTGCACGGCCCCGACCGGACGCGCCGCA ACGAATATGACGGAGAGACA
Downstream 100 bases:
>100_bases TGGAAGCGCAGACCTACCACGGCTACCAGATCTGGGGCCACGCGATCCTGCAGCAGGACGAGATCATGCAGCCCGAGCGC TTCGCGGCGAGCGGCACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MVRLFGCGLLALTFASTGWAAEHYVEVWNPPEARQPAARTPDARLPTAHPGADARTGKSAEKHASATPKAAAKPPKRRVA QAVKAGSHRPAATATETRAAPRPVAQPAPGRLTVMQPAAPDATRALTFSDIPRQYTPDGNVLQVGTHGRSAEVTR
Sequences:
>Translated_155_residues MVRLFGCGLLALTFASTGWAAEHYVEVWNPPEARQPAARTPDARLPTAHPGADARTGKSAEKHASATPKAAAKPPKRRVA QAVKAGSHRPAATATETRAAPRPVAQPAPGRLTVMQPAAPDATRALTFSDIPRQYTPDGNVLQVGTHGRSAEVTR >Mature_155_residues MVRLFGCGLLALTFASTGWAAEHYVEVWNPPEARQPAARTPDARLPTAHPGADARTGKSAEKHASATPKAAAKPPKRRVA QAVKAGSHRPAATATETRAAPRPVAQPAPGRLTVMQPAAPDATRALTFSDIPRQYTPDGNVLQVGTHGRSAEVTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16311; Mature: 16311
Theoretical pI: Translated: 11.44; Mature: 11.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLFGCGLLALTFASTGWAAEHYVEVWNPPEARQPAARTPDARLPTAHPGADARTGKSA CEEEECHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EKHASATPKAAAKPPKRRVAQAVKAGSHRPAATATETRAAPRPVAQPAPGRLTVMQPAAP HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC DATRALTFSDIPRQYTPDGNVLQVGTHGRSAEVTR CCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MVRLFGCGLLALTFASTGWAAEHYVEVWNPPEARQPAARTPDARLPTAHPGADARTGKSA CEEEECHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EKHASATPKAAAKPPKRRVAQAVKAGSHRPAATATETRAAPRPVAQPAPGRLTVMQPAAP HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC DATRALTFSDIPRQYTPDGNVLQVGTHGRSAEVTR CCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA