Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690997

Identifier: 116690997

GI number: 116690997

Start: 3292126

End: 3292530

Strand: Direct

Name: 116690997

Synonym: Bcen2424_2979

Alternate gene names: NA

Gene position: 3292126-3292530 (Clockwise)

Preceding gene: 116690996

Following gene: 116690998

Centisome position: 94.5

GC content: 64.69

Gene sequence:

>405_bases
ATGTTTTCCGCTCTCCTGCACCCCCGCCTCGCGGATTGCCGCAGGCTCTACCTGCGCGACTACGAGGTGCACATCAACAT
CGGGGCCTTCGAACACGAGAAGCGCGGCGAGCAACGCGTCGTCATCAACATCGACCTGTTCGTGCCGCTCGCGCTGTCCA
CCCCGGTCGACGACCGGCTGCACGAAGTCGTCGACTACGACCTGATGAAGCAGAGCGTCGCGCAGAGCCTGGCGCGCGGC
CACATCCACCTGCAGGAAACGCTGTGCGATTCGATCGCCGCGCACCTGCTGGCGCACGATACCGTGCGCGCGGTACGTGT
CCGTACCGAGAAACCGGACGCCTATCCGGACTGCGACGCCGTCGGCGTCGAAGTCTTTCGCATCAAGGACGAGGAGCGCC
AATGA

Upstream 100 bases:

>100_bases
TGCCGCCCGCCGCCGGCCCGAATGAACCGCGCGGGTGCGGCCTGAGCGCCGCCGCCCGCGCCGCTTTGCGTGCGCGCACG
CCAATTTGACTGGGACGACC

Downstream 100 bases:

>100_bases
ACGCCCCCCACATGAACGACACGGCGGCCGACGCCGCCACGCTGGACGACGCCGCCGCGCCGGCCGGCCGCCCCGCGCTG
ACGCGCCGCGAGCAGAAGGA

Product: dihydroneopterin aldolase

Products: NA

Alternate protein names: Dihydroneopterin Aldolase Family Protein; Dihydroneopterin Aldolase Protein

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MFSALLHPRLADCRRLYLRDYEVHINIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRLHEVVDYDLMKQSVAQSLARG
HIHLQETLCDSIAAHLLAHDTVRAVRVRTEKPDAYPDCDAVGVEVFRIKDEERQ

Sequences:

>Translated_134_residues
MFSALLHPRLADCRRLYLRDYEVHINIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRLHEVVDYDLMKQSVAQSLARG
HIHLQETLCDSIAAHLLAHDTVRAVRVRTEKPDAYPDCDAVGVEVFRIKDEERQ
>Mature_134_residues
MFSALLHPRLADCRRLYLRDYEVHINIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRLHEVVDYDLMKQSVAQSLARG
HIHLQETLCDSIAAHLLAHDTVRAVRVRTEKPDAYPDCDAVGVEVFRIKDEERQ

Specific function: Unknown

COG id: COG1539

COG function: function code H; Dihydroneopterin aldolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15412; Mature: 15412

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSALLHPRLADCRRLYLRDYEVHINIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRL
CCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEECCCHHHHH
HEVVDYDLMKQSVAQSLARGHIHLQETLCDSIAAHLLAHDTVRAVRVRTEKPDAYPDCDA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCC
VGVEVFRIKDEERQ
CCEEEEEECCCCCC
>Mature Secondary Structure
MFSALLHPRLADCRRLYLRDYEVHINIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRL
CCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEECCCHHHHH
HEVVDYDLMKQSVAQSLARGHIHLQETLCDSIAAHLLAHDTVRAVRVRTEKPDAYPDCDA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCC
VGVEVFRIKDEERQ
CCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA