| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690975
Identifier: 116690975
GI number: 116690975
Start: 3270363
End: 3270986
Strand: Reverse
Name: 116690975
Synonym: Bcen2424_2957
Alternate gene names: NA
Gene position: 3270986-3270363 (Counterclockwise)
Preceding gene: 116690980
Following gene: 116690973
Centisome position: 93.89
GC content: 72.92
Gene sequence:
>624_bases ATGCGCGCATGCAGCAAATCGGCGTGGCCGCCGCGGCTCGTCACCGTTCCGGGCCTGCACGGCAGCGAAGGCGCCCACTG GCAGACCTGGCTCGAGCGGCAGCTCCCGCGCTCGTTGCGCGTCGAGCAGCACGACTGGGACGCGCCCGATCTCGCGGGCT GGGCGCAATCGGTGCGCGCGCTGCTCGATCGCGAGCGCGGCCCGTTCGTGCTCGCCGCGCACAGCTTCGGCTGCCTCGCG GCCGCGCATGCGCTCGCGCAGTGGCCGCACGTGGGCGACGTCGCGGGCGTGCTGTTCGTCGCGCCGGCCAGCCCGAAGAA ATTCACCTTTGCCGGGCCGTTCGACGCGCGCCGGCTCGCGGTGCCGTCGATCGTGATCGGCAGCGAGACCGATCCGTGGA TGCCACTCGCCGATGCGCGCGCGCTCGCACAGCGCCTGGGCAGCGCATTCGTGAACCTCGGCGACGCCGGGCACATCAAC ACGGCGGCCGGCTTCGGGCCCTGGCCGCGCGCGAAATATTTCATCGACACGCTGGTGCATTGCGCGGCGCCGCTGCGCTT TCGCGACGCGGACGACGGCTTCGAGGCCGCGCTCGTCGATCGCGCGCTCGCGCACGCGGTCTGA
Upstream 100 bases:
>100_bases GGGCCGTCGGCCGAGCAAAAGCAAAGCACAAAATATTGGTTCGGTCGCCGCGTACCCGACGCCACAATCGAACCTCGTCT TCAAGCAAGCGAGGGCAATC
Downstream 100 bases:
>100_bases CGGGCGGGTTGCGCGGCGCATGCCGCGCGGCGGCGGTCGCGGCATCGCGCGCCGTCGCGCTTGCGGCGCTTGTGGCGCGC GCACGGGCCTGACGGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MRACSKSAWPPRLVTVPGLHGSEGAHWQTWLERQLPRSLRVEQHDWDAPDLAGWAQSVRALLDRERGPFVLAAHSFGCLA AAHALAQWPHVGDVAGVLFVAPASPKKFTFAGPFDARRLAVPSIVIGSETDPWMPLADARALAQRLGSAFVNLGDAGHIN TAAGFGPWPRAKYFIDTLVHCAAPLRFRDADDGFEAALVDRALAHAV
Sequences:
>Translated_207_residues MRACSKSAWPPRLVTVPGLHGSEGAHWQTWLERQLPRSLRVEQHDWDAPDLAGWAQSVRALLDRERGPFVLAAHSFGCLA AAHALAQWPHVGDVAGVLFVAPASPKKFTFAGPFDARRLAVPSIVIGSETDPWMPLADARALAQRLGSAFVNLGDAGHIN TAAGFGPWPRAKYFIDTLVHCAAPLRFRDADDGFEAALVDRALAHAV >Mature_207_residues MRACSKSAWPPRLVTVPGLHGSEGAHWQTWLERQLPRSLRVEQHDWDAPDLAGWAQSVRALLDRERGPFVLAAHSFGCLA AAHALAQWPHVGDVAGVLFVAPASPKKFTFAGPFDARRLAVPSIVIGSETDPWMPLADARALAQRLGSAFVNLGDAGHIN TAAGFGPWPRAKYFIDTLVHCAAPLRFRDADDGFEAALVDRALAHAV
Specific function: Unknown
COG id: COG3545
COG function: function code R; Predicted esterase of the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22381; Mature: 22381
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRACSKSAWPPRLVTVPGLHGSEGAHWQTWLERQLPRSLRVEQHDWDAPDLAGWAQSVRA CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHH LLDRERGPFVLAAHSFGCLAAAHALAQWPHVGDVAGVLFVAPASPKKFTFAGPFDARRLA HHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEECCCCCCCEE VPSIVIGSETDPWMPLADARALAQRLGSAFVNLGDAGHINTAAGFGPWPRAKYFIDTLVH CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH CAAPLRFRDADDGFEAALVDRALAHAV HHCCCEECCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRACSKSAWPPRLVTVPGLHGSEGAHWQTWLERQLPRSLRVEQHDWDAPDLAGWAQSVRA CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHH LLDRERGPFVLAAHSFGCLAAAHALAQWPHVGDVAGVLFVAPASPKKFTFAGPFDARRLA HHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEECCCCCCCEE VPSIVIGSETDPWMPLADARALAQRLGSAFVNLGDAGHINTAAGFGPWPRAKYFIDTLVH CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH CAAPLRFRDADDGFEAALVDRALAHAV HHCCCEECCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA