Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690917

Identifier: 116690917

GI number: 116690917

Start: 3202445

End: 3203374

Strand: Reverse

Name: 116690917

Synonym: Bcen2424_2899

Alternate gene names: NA

Gene position: 3203374-3202445 (Counterclockwise)

Preceding gene: 116690918

Following gene: 116690916

Centisome position: 91.95

GC content: 69.25

Gene sequence:

>930_bases
ATGGAAAACAAATCACATGCGTTCTGGGCCGGCCTGTTCACGATCGCGCTGACGCTCGCGATCGCGGGCACCGTGTTCTG
GTTCAACGTCGACCGCACCGTGCGCGTGCCGTACGACCTGCTCGCGCGCACCAACGTGACGGGACTGTTCCCGGATGCGG
CGGTGCGCTTTCGCGGCCTCGACGTCGGCAAGGTGCAGTCGATCGGCTTCGATCGCACGCATCCGGGCCAGATCCGCATC
CGTATCCTCGTCGATCACGATGCGCCGATCACGCAGTCGACCTACGGCAGCCTCGGCTTCCAGGGCGTGACGGGCATCGC
GTTCGTGCAACTGGAGGATACGGGGCGCGATCTGTCGCCGCTACCGTCGTCGCCGAAGGCGATCGCGCAGATTCCGATGC
GGCCGAGCCTGTTCGACCAGATCCAGGAGCGCGGCGACGTGCTGCTGCGGCAGCTCGAGCTCGCTGCGAAGAGCGCGAAC
GCGCTGATGTCGCCCGAGATGCGCGAGCAGTTGCGCGCGACCGCCGAAAGCCTGCAGCACGCGGCCGACGGCGCCGCGAC
GCTGACGAAGCAGCTCGGCCCGGCAGTCACCGCGCTGCCCGAGACGATGCACGAGGTGAACCGCGCGATGGCGTCGGCGA
ACACGCTGCTGCAGCCGAACGGGCCGCTCGTGTCGAACCTGAACAAGGCCGGCACGGCCGCCGAGCAGGTCGGCGTCGCG
CTGAACGGCCTCAACGCGCGCGTGCAGTACGACACGCTGCCGCGCTTCAATGCGCTGGCCGACAGCGTCGGCGACGCGTC
GCGGCAATTGAAGGACGTCGCCGGTGAACTTGGCCGCAACCCGCGCAGTCTGTTGTTCGGTTCGCCCGGCGCCGCGCCGG
GGCCCGGCGAGGCGGGCTTCGTCTGGCCGGGTGCGACGGCCGGGAAGTGA

Upstream 100 bases:

>100_bases
CATTGCAGGCGCTGCCGCCCGAGCGGCGCGCGAAGCTGCCGAAGGCGGCCCTCGAACCGGCGCTCTCGAGCGTCGAGCTG
TAGAAGCAAGGAACCCGCGA

Downstream 100 bases:

>100_bases
CAGGCGGGACGTACGGAACATACGGGACACCCCGATCCGGGACGCCCCGCAGCAGTTGATCGATCGTCCGGCCGGGAACG
GCCGGACAGGACGCCCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: Mce Related Protein; Mammalian Cell Entry Related Domain-Containing Protein; ABC Transporter Permease; ABC-Type Transporter Periplasmic Component; ABC Membrane Transporter Periplasmic Protein; Mce Related Family; Mce Family Protein; MCE-Like Family Protein; ABC-Type Transport System Periplasmic Component LinM; Signal Peptide Protein; ABC-Type Transport System Protein; Periplasmic Protein; Virulence Factor Mce-Like Protein; Exported Protein

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTVRVPYDLLARTNVTGLFPDAAVRFRGLDVGKVQSIGFDRTHPGQIRI
RILVDHDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLSPLPSSPKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSAN
ALMSPEMREQLRATAESLQHAADGAATLTKQLGPAVTALPETMHEVNRAMASANTLLQPNGPLVSNLNKAGTAAEQVGVA
LNGLNARVQYDTLPRFNALADSVGDASRQLKDVAGELGRNPRSLLFGSPGAAPGPGEAGFVWPGATAGK

Sequences:

>Translated_309_residues
MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTVRVPYDLLARTNVTGLFPDAAVRFRGLDVGKVQSIGFDRTHPGQIRI
RILVDHDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLSPLPSSPKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSAN
ALMSPEMREQLRATAESLQHAADGAATLTKQLGPAVTALPETMHEVNRAMASANTLLQPNGPLVSNLNKAGTAAEQVGVA
LNGLNARVQYDTLPRFNALADSVGDASRQLKDVAGELGRNPRSLLFGSPGAAPGPGEAGFVWPGATAGK
>Mature_309_residues
MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTVRVPYDLLARTNVTGLFPDAAVRFRGLDVGKVQSIGFDRTHPGQIRI
RILVDHDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLSPLPSSPKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSAN
ALMSPEMREQLRATAESLQHAADGAATLTKQLGPAVTALPETMHEVNRAMASANTLLQPNGPLVSNLNKAGTAAEQVGVA
LNGLNARVQYDTLPRFNALADSVGDASRQLKDVAGELGRNPRSLLFGSPGAAPGPGEAGFVWPGATAGK

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32827; Mature: 32827

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTVRVPYDLLARTNVTGLFPDAAVRFRGL
CCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCEEECCHHHHHHCCCCCCCCCHHHEEECC
DVGKVQSIGFDRTHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLSP
CCCHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
LPSSPKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSANALMSPEMREQLRATAESLQH
CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AADGAATLTKQLGPAVTALPETMHEVNRAMASANTLLQPNGPLVSNLNKAGTAAEQVGVA
HHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHCCCHHCCHHHHHHHH
LNGLNARVQYDTLPRFNALADSVGDASRQLKDVAGELGRNPRSLLFGSPGAAPGPGEAGF
EECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCE
VWPGATAGK
ECCCCCCCC
>Mature Secondary Structure
MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTVRVPYDLLARTNVTGLFPDAAVRFRGL
CCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCEEECCHHHHHHCCCCCCCCCHHHEEECC
DVGKVQSIGFDRTHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLSP
CCCHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
LPSSPKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSANALMSPEMREQLRATAESLQH
CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AADGAATLTKQLGPAVTALPETMHEVNRAMASANTLLQPNGPLVSNLNKAGTAAEQVGVA
HHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHCCCHHCCHHHHHHHH
LNGLNARVQYDTLPRFNALADSVGDASRQLKDVAGELGRNPRSLLFGSPGAAPGPGEAGF
EECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCE
VWPGATAGK
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA