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The map label for this gene is ctaG [H]

Identifier: 116690864

GI number: 116690864

Start: 3144687

End: 3145295

Strand: Reverse

Name: ctaG [H]

Synonym: Bcen2424_2844

Alternate gene names: 116690864

Gene position: 3145295-3144687 (Counterclockwise)

Preceding gene: 116690865

Following gene: 116690863

Centisome position: 90.28

GC content: 63.88

Gene sequence:

>609_bases
ATGTCGAAGCCGGAAGAGGGCGCCGTGGATCGTGCGTTCAATCGTTCGATGCTGGTGAAGCTCTTCGTCGTGGCCGGGCT
GATGTTCGGTTTCGGCTTCGCGCTGATCCCGATGTATCGGGCGATCTGCCAGATCACCGGCATCAACAACCTGGTGCAGC
GCGATGTCAGCGAGCGCGAGGTGAAGAACTCGCAGGTCGACACCAGCCGCACGGTGTCGGTCGAGTTCGATGCGAACGCG
CGCGGGCCGCTCGGGTTCAAGCCGGAGCACAACAGCCTCGACGTGCATCCGGGCGAACTGACGACGATCGTGTACGACGT
GACGAACGGGCAGGGCCGGCCGGTCGTCGCGCAGGCGATTCCGAGCTACGCGCCGAAGCAGGCGACGGAGTTCTTCAAGA
AGATCGAGTGCTTTTGCTTCACGCAGCAGACGCTGACCGCGAACGAGTCGCGCAAGATGCCGGTGGTGTTCGTGATCGAC
CCGAAATTGCCGAAGGACGTGAAGACGATCACGCTGTCGTACACGTTCTTCGAGCTGAATACCCCGGCCACGCCGGCACC
GGCGCAGCGCAGCACGGCGGCGCAGGGTGCGGCGAAGCCGGACGCATGA

Upstream 100 bases:

>100_bases
TCGTCATCGCCGCCGTTTTTTTCGTGGGTGTCGTGATCAAGCAGTGGTGGCTGTCCACCCACTGATGCAGTAACTGACGC
AGTAGCGAGGAAGTCGTCGT

Downstream 100 bases:

>100_bases
CGAAGGAGACGGGGCGATGACAGAAGTCAAGCGGAGCGGAACGTTCGGTCAGGCGCTGAAAGCGGTGCTGTGGTCGTTCT
TCGGGGTGCGCAAGCGGCGC

Product: cytochrome C oxidase assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSKPEEGAVDRAFNRSMLVKLFVVAGLMFGFGFALIPMYRAICQITGINNLVQRDVSEREVKNSQVDTSRTVSVEFDANA
RGPLGFKPEHNSLDVHPGELTTIVYDVTNGQGRPVVAQAIPSYAPKQATEFFKKIECFCFTQQTLTANESRKMPVVFVID
PKLPKDVKTITLSYTFFELNTPATPAPAQRSTAAQGAAKPDA

Sequences:

>Translated_202_residues
MSKPEEGAVDRAFNRSMLVKLFVVAGLMFGFGFALIPMYRAICQITGINNLVQRDVSEREVKNSQVDTSRTVSVEFDANA
RGPLGFKPEHNSLDVHPGELTTIVYDVTNGQGRPVVAQAIPSYAPKQATEFFKKIECFCFTQQTLTANESRKMPVVFVID
PKLPKDVKTITLSYTFFELNTPATPAPAQRSTAAQGAAKPDA
>Mature_201_residues
SKPEEGAVDRAFNRSMLVKLFVVAGLMFGFGFALIPMYRAICQITGINNLVQRDVSEREVKNSQVDTSRTVSVEFDANAR
GPLGFKPEHNSLDVHPGELTTIVYDVTNGQGRPVVAQAIPSYAPKQATEFFKKIECFCFTQQTLTANESRKMPVVFVIDP
KLPKDVKTITLSYTFFELNTPATPAPAQRSTAAQGAAKPDA

Specific function: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I [H]

COG id: COG3175

COG function: function code O; Cytochrome oxidase assembly factor

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX11/CtaG family [H]

Homologues:

Organism=Homo sapiens, GI4758034, Length=175, Percent_Identity=34.2857142857143, Blast_Score=109, Evalue=2e-24,
Organism=Homo sapiens, GI242247057, Length=138, Percent_Identity=26.8115942028986, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71990692, Length=172, Percent_Identity=33.1395348837209, Blast_Score=100, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6325125, Length=181, Percent_Identity=34.2541436464088, Blast_Score=104, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24581944, Length=188, Percent_Identity=31.3829787234043, Blast_Score=101, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007533 [H]

Pfam domain/function: PF04442 CtaG_Cox11 [H]

EC number: NA

Molecular weight: Translated: 22177; Mature: 22045

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPEEGAVDRAFNRSMLVKLFVVAGLMFGFGFALIPMYRAICQITGINNLVQRDVSERE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHH
VKNSQVDTSRTVSVEFDANARGPLGFKPEHNSLDVHPGELTTIVYDVTNGQGRPVVAQAI
HHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEHHHHC
PSYAPKQATEFFKKIECFCFTQQTLTANESRKMPVVFVIDPKLPKDVKTITLSYTFFELN
CCCCCHHHHHHHHHHHHEEEECHHHCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEEC
TPATPAPAQRSTAAQGAAKPDA
CCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
SKPEEGAVDRAFNRSMLVKLFVVAGLMFGFGFALIPMYRAICQITGINNLVQRDVSERE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHH
VKNSQVDTSRTVSVEFDANARGPLGFKPEHNSLDVHPGELTTIVYDVTNGQGRPVVAQAI
HHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEHHHHC
PSYAPKQATEFFKKIECFCFTQQTLTANESRKMPVVFVIDPKLPKDVKTITLSYTFFELN
CCCCCHHHHHHHHHHHHEEEECHHHCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEEC
TPATPAPAQRSTAAQGAAKPDA
CCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA