| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690855
Identifier: 116690855
GI number: 116690855
Start: 3138443
End: 3138733
Strand: Direct
Name: 116690855
Synonym: Bcen2424_2835
Alternate gene names: NA
Gene position: 3138443-3138733 (Clockwise)
Preceding gene: 116690852
Following gene: 116690861
Centisome position: 90.08
GC content: 67.01
Gene sequence:
>291_bases ATGTACGTCATCGACATCCACTACACCGCGTCGCTCGAGCGCATCGACGACGCGCTCGAACGCCACCGCGCGTACCTGCA GCCGCAGTTCGACAAGGGCATCTTCATCGCGGCGGGGCCGAAGGTGCCGCGCGAAGGCGGCGTGATCCTCGCGGCCCGCA TCGATCGCGACGAACTCGACGCGATCCTCGAAACCGACCCGTTCGTCACCGAGGGGCTCGCCACCTATCGCGTGACGGAA TTCCGGATCACGCGCGCCGCGTCGGGCTTCAACGTGCCGGCGTTGCCGTAA
Upstream 100 bases:
>100_bases CGACAAACGCACCGCCCGCCGGCGCGACAGCCCGCATCCGCTGTGCTAAAAAGACCGGCTGACCGGCGCACAAGGCGCCG GCATCATTCCAGGGCCATCC
Downstream 100 bases:
>100_bases CGCGGCGTCGGCGCAATACGCACGCAATACGCGCGCATGCCGACGCGCCGCCCGGCGGGCAGCGCATGCGCACGACAACG AGAGCGGGAAAACGCGACGG
Product: YCII-related
Products: NA
Alternate protein names: YCII-Related Protein; YCII-Related Domain Superfamily Protein; YCII-Related Domain-Containing Protein; Ycii-Related Protein; YCII-Related Domain Superfamily; YCII-Like Protein; GTP Cyclohydrolase II; YciI Domain-Containing Protein; YciL Domain-Containing Protein; YCII-Related Domain Family Protein
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MYVIDIHYTASLERIDDALERHRAYLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELDAILETDPFVTEGLATYRVTE FRITRAASGFNVPALP
Sequences:
>Translated_96_residues MYVIDIHYTASLERIDDALERHRAYLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELDAILETDPFVTEGLATYRVTE FRITRAASGFNVPALP >Mature_96_residues MYVIDIHYTASLERIDDALERHRAYLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELDAILETDPFVTEGLATYRVTE FRITRAASGFNVPALP
Specific function: Unknown
COG id: COG2350
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10746; Mature: 10746
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVIDIHYTASLERIDDALERHRAYLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELD CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCHHHHH AILETDPFVTEGLATYRVTEFRITRAASGFNVPALP HHHCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MYVIDIHYTASLERIDDALERHRAYLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELD CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCHHHHH AILETDPFVTEGLATYRVTEFRITRAASGFNVPALP HHHCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA