Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690851

Identifier: 116690851

GI number: 116690851

Start: 3133864

End: 3134829

Strand: Reverse

Name: 116690851

Synonym: Bcen2424_2831

Alternate gene names: NA

Gene position: 3134829-3133864 (Counterclockwise)

Preceding gene: 116690853

Following gene: 116690850

Centisome position: 89.98

GC content: 66.77

Gene sequence:

>966_bases
ATGAAGCGATTCAAGACTTTCGCGATCCGTTCGATCACGGCCGGCGTCGCCGCACTCGCGCTGGCCGGCGCCGCGCATGC
CCAGACCGTCAAGGTGCTGTCGATCGTCGACCATCCGGCGCTCGATGCGATCCGCGACGGCGTGCGCGCCGAACTGAAGG
CGGAAGGTTACGGCGACGACAAGCTCAAGTGGGAATACCAGAGCGCGCAGGGCAACACGGGCACGGCCGCGCAGATCGCG
CGCAAGTTCGTCGGCGACAAGCCAGACGTGATCGTCGCGATCGCGACGCCGGCCGCGCAGTCGGTCGTCGCCGCAACGAA
GAGCGTGCCGGTCGTCTACTCGGGCGTGACCGACCCGGTCGCCGCGCAGCTCGTGAAGGGCTGGGGCCCGTCGGGCACCA
ACGTGACGGGCGTGTCCGACAAGCTGCCGCTCGATCGCCAGGTCGCGCTGATCAAGCGCGTCGTGCCGAATGCGAAGACG
GTCGGCATGGTCTACAACCCGGGCGAGGCGAATTCGGTCGTCGTCGTGAAGGAGCTCAAGGAGATCCTCGCGAAGCAGGG
GATGACGCTGAAGGAAGCGGCCGCGCCGCGTACCGTCGACATCGGCCCGGCCGCGAAGAGCCTGATCGGCAAGGTCGACG
TGATCTACACGAATACCGACAACAACGTCGTGTCCGCGTACGAAGCGCTCGTGAAGGTCGCGAACGAAGCGAAGATCCCG
CTCGTCGCGGGCGATACCGACAGCGTGAAGCGCGGCGGCATCGCGGCGCTCGGCATCAACTACGGCGACCTCGGCCGCCA
GACGGGCAAGGTCGTCGCGCGCATCCTGAAGGGCGAGAAGCCGGGCGCGATCGCGTCGGAGACGAGCAGCAACCTCGAGC
TGTTCGTCAATACGGGCGCGGCCGCGAAGCAGGGCGTCACGCTGTCGCCAGATCTCGTCAAGGAAGCGAAGACGGTCATC
AAGTAA

Upstream 100 bases:

>100_bases
GCGGGCCGATCGCCCGCGTTTCGTACGCACGGGCGGCGCCCGCCCGACGGCGGCGGGAATCCATCATCCAGAACCGACAC
AATACGGGGGAGACATACCC

Downstream 100 bases:

>100_bases
GCCGCGGCCCGACTGCCGCGCTGGCAGGCCCGATCCGGGTCTCGACGACATCGCCGGACGGGCGGCCTCCACCCGGGGCC
GCCCGTTCGCTTCGCCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter; Lipoprotein; ABC Transporter Permease; ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component; Permease; Permease Protein; Exported Protein; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease Protein; ABC-Type Transporter

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MKRFKTFAIRSITAGVAALALAGAAHAQTVKVLSIVDHPALDAIRDGVRAELKAEGYGDDKLKWEYQSAQGNTGTAAQIA
RKFVGDKPDVIVAIATPAAQSVVAATKSVPVVYSGVTDPVAAQLVKGWGPSGTNVTGVSDKLPLDRQVALIKRVVPNAKT
VGMVYNPGEANSVVVVKELKEILAKQGMTLKEAAAPRTVDIGPAAKSLIGKVDVIYTNTDNNVVSAYEALVKVANEAKIP
LVAGDTDSVKRGGIAALGINYGDLGRQTGKVVARILKGEKPGAIASETSSNLELFVNTGAAAKQGVTLSPDLVKEAKTVI
K

Sequences:

>Translated_321_residues
MKRFKTFAIRSITAGVAALALAGAAHAQTVKVLSIVDHPALDAIRDGVRAELKAEGYGDDKLKWEYQSAQGNTGTAAQIA
RKFVGDKPDVIVAIATPAAQSVVAATKSVPVVYSGVTDPVAAQLVKGWGPSGTNVTGVSDKLPLDRQVALIKRVVPNAKT
VGMVYNPGEANSVVVVKELKEILAKQGMTLKEAAAPRTVDIGPAAKSLIGKVDVIYTNTDNNVVSAYEALVKVANEAKIP
LVAGDTDSVKRGGIAALGINYGDLGRQTGKVVARILKGEKPGAIASETSSNLELFVNTGAAAKQGVTLSPDLVKEAKTVI
K
>Mature_321_residues
MKRFKTFAIRSITAGVAALALAGAAHAQTVKVLSIVDHPALDAIRDGVRAELKAEGYGDDKLKWEYQSAQGNTGTAAQIA
RKFVGDKPDVIVAIATPAAQSVVAATKSVPVVYSGVTDPVAAQLVKGWGPSGTNVTGVSDKLPLDRQVALIKRVVPNAKT
VGMVYNPGEANSVVVVKELKEILAKQGMTLKEAAAPRTVDIGPAAKSLIGKVDVIYTNTDNNVVSAYEALVKVANEAKIP
LVAGDTDSVKRGGIAALGINYGDLGRQTGKVVARILKGEKPGAIASETSSNLELFVNTGAAAKQGVTLSPDLVKEAKTVI
K

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33256; Mature: 33256

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFKTFAIRSITAGVAALALAGAAHAQTVKVLSIVDHPALDAIRDGVRAELKAEGYGDD
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCC
KLKWEYQSAQGNTGTAAQIARKFVGDKPDVIVAIATPAAQSVVAATKSVPVVYSGVTDPV
CEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCEEECCCCCHH
AAQLVKGWGPSGTNVTGVSDKLPLDRQVALIKRVVPNAKTVGMVYNPGEANSVVVVKELK
HHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEHHHHH
EILAKQGMTLKEAAAPRTVDIGPAAKSLIGKVDVIYTNTDNNVVSAYEALVKVANEAKIP
HHHHHCCCCHHHHCCCCEEECCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCE
LVAGDTDSVKRGGIAALGINYGDLGRQTGKVVARILKGEKPGAIASETSSNLELFVNTGA
EEECCCCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC
AAKQGVTLSPDLVKEAKTVIK
CCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKRFKTFAIRSITAGVAALALAGAAHAQTVKVLSIVDHPALDAIRDGVRAELKAEGYGDD
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCC
KLKWEYQSAQGNTGTAAQIARKFVGDKPDVIVAIATPAAQSVVAATKSVPVVYSGVTDPV
CEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCEEECCCCCHH
AAQLVKGWGPSGTNVTGVSDKLPLDRQVALIKRVVPNAKTVGMVYNPGEANSVVVVKELK
HHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEHHHHH
EILAKQGMTLKEAAAPRTVDIGPAAKSLIGKVDVIYTNTDNNVVSAYEALVKVANEAKIP
HHHHHCCCCHHHHCCCCEEECCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCE
LVAGDTDSVKRGGIAALGINYGDLGRQTGKVVARILKGEKPGAIASETSSNLELFVNTGA
EEECCCCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC
AAKQGVTLSPDLVKEAKTVIK
CCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA