Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is chb [H]

Identifier: 116690840

GI number: 116690840

Start: 3116035

End: 3118548

Strand: Direct

Name: chb [H]

Synonym: Bcen2424_2820

Alternate gene names: 116690840

Gene position: 3116035-3118548 (Clockwise)

Preceding gene: 116690839

Following gene: 116690852

Centisome position: 89.44

GC content: 70.96

Gene sequence:

>2514_bases
ATGCCCTCTTTTTCTCAGGAGTTCGAATTGAAGCGTACCTTGCCATCCCTCATTGCCGGCCTGCTGATCGCGGTGCTGTC
GCCGGCTGCGATCGCCGCGGTACCGGCGTCGGGCACCGCCAACGCGACCGCCGGCAGCGCGCAAGCGGCCGCCGCACAAG
CAGCCAGCCTCGCGACGCAGCTGTCGAACGGCCTCGCGTTGCGCGTCGCCGTCGACAACAACCACGCGGCCGCGGCCGGC
GTGCCGTGCGCCGATCTCGGCGCCGACGGCGCTGCCTGCGCGACCGGCCGCCTGATCCTGCAGAACCGCGGCCACCAGGC
GATCGCCGACGGCGGCTGGAAGCTCTACCTGCACAGCATCCGCCGCCTGCTGCGGATCGACCGTCCAGGCTTCGCGCTGC
GGCGGCTCACCGGCGACCTGTACGAACTGACGCCGCAGCCGGGCTCGGTGCGGCTCGCGCCCGGCGAGCGCATCGAGCTG
CCGTTCGTCGCCGAATACTGGCTGCTGCGCTACAGCGACGTGATTCCGCGTCCGTACGTCGTCGTCGACGGCGCGCCGCC
GGCCGTGCTGCGCTACAACGACACCGACAACGAGCTGCGCTACGTCGAATCGCTGCCGGCCGACGCGCAGAACAACTCGA
CCGGCAACGCGCCGCCGGTGGCCGCACGGCCCGATCCGGGCCGCGCGCTGCCGAGCGTGAAGCGCGAACTGCCGCTGCCC
GGCACGCTCGAGCTGCGCGGCGTCGAACTCGCGCTGCCGGATCTGCCGGACGCGCAGGTCGCGGCGCTGCGCGAGCGCGC
GACGACCCTCGGGCTCGATGGCGCAGGCGTGCCGGTGCGCGGCTTCGTCGCGCCGCGCCGGCTGCCGGCCGACATCGCGA
CACCCGGCGGCTATCGGCTCGCGATCGGGCCGCGCGGCGTGCTGATCGAAGGCTACGATCGCGCGGGCCTCTACTACGGC
GTGCAGACGCTCTACTCGCTCGCGCCGGCCGGCGGGGGCCCGATCCCGGCGATGCTAGTCGAGGATGCGCCGCGCTTCAC
GCATCGCGGCATGCACGTCGACCTCGCGCGCAACTTCAAGCAGCCGGCGACGCTGCGCCGCCTGATCGACCAGATGAGCG
CGTACAAGCTCAATCGCCTGCACCTGCATCTGTCCGACGACGAAGGCTGGCGCATCGAGATTCCCGGCCTGCCCGAGCTG
ACCGAGATCGGCTCGCGCCGCTGCCACGACCCGAGCGAGACGCGCTGCCTGCTGCCGCAGCTCGGCTCCGGCCCCGACAA
TCGCTCGGGCGGCGGCTACCTGACGCGCGACGACTACGTGGCGCTCGTGCGCTATGCGGCCGCGCGCTTCGTGCAGATCA
TCCCCGAGATCGACATGCCCGCGCATGCACGCGCGGCCGTCGTGACGATGGAGGCGCGCTACCGGCGGCTGCATGCGGCG
GGCCGCGAGCAGGAAGCGAACGCGTACCGGCTGCTCGACCCGCAGGACACGACGAACCTGACGACGGTGCAGTTCTACGA
CCGGCGCAGCGACCTGAACCCGTGCGTGCCGGGCGCGCTCGACTTCGCGTCGAAGGTGATCCGCGAGATCGCGGCGATGC
ACGCGGACGCGCAGGCGCCGCTGCAGACCTGGCACTACGGCGGCGACGAAGCGAAGAACATCTTCCTCGGCGGCGGCTTC
CAGGCGCTCAACGGCACCGATCCGAACAAGGGGCGCATCGATCTGGCCGCGCAAGACAAGCCGTGGGCACGGTCGCCGGC
TTGCACGGCGCTGCTCCAGCGCGGCGAGATCAAGTCGATCGACGAGCTGCCGACGCGTTTCGCGAAACAGGTGAGCGCGG
CGGTCAACGCGAACGGGATCGGCACGATGGCCGCGTGGCAGGACGGCATCAAGCATGCGAACGGGCCGCAGGATTTCAGC
ACGCGCCACGTGATGGTGTCGCTGTGGGACACGATCTTCTGGGGCGCGTCGGACAGCGCGCGCGACCTGAGCGGCAAGGG
CTACCAGACGGTGCTCGCGCTGCCCGACTACCTGTACTTCGATTTCCCGTACACGCTCAATCCGCGCGAGCGCGGCTACT
ACTGGGGCTCGCACGCGACCGACGAGTACAAGGTGTTCTCGCTCGCGCCGGAGAACCTGCCGCAGAACGCCGAAGTGATG
GGCGACCGCGACGGCAACCCGTTCGAGGTGACGGGCACGGGCCCCGCGCCGCGCATCGAGGGCATGCAGGGCCAGGCGTG
GGGCGAGGTGATGCGCAACGATACCTTCCTCGAATACATGACCTATCCGCGGCTGCTCGCGCTCGCCGAGCGCGCGTGGC
ACCGGGCCGACTGGGAGCTGCCGTACGCGGCCGGCGTGCGCTTCAAGCGCGGCGACACGCACCACGTCGACATCGCCGCG
CTGCAGCGCGACTGGGCCGGCTTCGCGACGCTGCTCACGCAACGCGAATTGCCGAAGCTGGAGCGCGCCGGGGTCGGCTA
CCGGAAGCCGACCTTCACGCTGACGAATCCGTGA

Upstream 100 bases:

>100_bases
GCCGAATGCACGTGGTGCAGCCGCATCGCCCCACGTGCCGGTATCTCCCGCAGCTCCACTGAAAGACCCGATCGCAGCGA
CGTCGCGTCACGGCGCCGCC

Downstream 100 bases:

>100_bases
GCGGGTGAACGGCCAGGCAGTTGAGCGGCAGGCGATGCGGACCCACGCATCGCTTATCGCACACTTATCACACACTGCCT
TCGCCAAAGCAAAAACGGCT

Product: Beta-N-acetylhexosaminidase

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 837; Mature: 836

Protein sequence:

>837_residues
MPSFSQEFELKRTLPSLIAGLLIAVLSPAAIAAVPASGTANATAGSAQAAAAQAASLATQLSNGLALRVAVDNNHAAAAG
VPCADLGADGAACATGRLILQNRGHQAIADGGWKLYLHSIRRLLRIDRPGFALRRLTGDLYELTPQPGSVRLAPGERIEL
PFVAEYWLLRYSDVIPRPYVVVDGAPPAVLRYNDTDNELRYVESLPADAQNNSTGNAPPVAARPDPGRALPSVKRELPLP
GTLELRGVELALPDLPDAQVAALRERATTLGLDGAGVPVRGFVAPRRLPADIATPGGYRLAIGPRGVLIEGYDRAGLYYG
VQTLYSLAPAGGGPIPAMLVEDAPRFTHRGMHVDLARNFKQPATLRRLIDQMSAYKLNRLHLHLSDDEGWRIEIPGLPEL
TEIGSRRCHDPSETRCLLPQLGSGPDNRSGGGYLTRDDYVALVRYAAARFVQIIPEIDMPAHARAAVVTMEARYRRLHAA
GREQEANAYRLLDPQDTTNLTTVQFYDRRSDLNPCVPGALDFASKVIREIAAMHADAQAPLQTWHYGGDEAKNIFLGGGF
QALNGTDPNKGRIDLAAQDKPWARSPACTALLQRGEIKSIDELPTRFAKQVSAAVNANGIGTMAAWQDGIKHANGPQDFS
TRHVMVSLWDTIFWGASDSARDLSGKGYQTVLALPDYLYFDFPYTLNPRERGYYWGSHATDEYKVFSLAPENLPQNAEVM
GDRDGNPFEVTGTGPAPRIEGMQGQAWGEVMRNDTFLEYMTYPRLLALAERAWHRADWELPYAAGVRFKRGDTHHVDIAA
LQRDWAGFATLLTQRELPKLERAGVGYRKPTFTLTNP

Sequences:

>Translated_837_residues
MPSFSQEFELKRTLPSLIAGLLIAVLSPAAIAAVPASGTANATAGSAQAAAAQAASLATQLSNGLALRVAVDNNHAAAAG
VPCADLGADGAACATGRLILQNRGHQAIADGGWKLYLHSIRRLLRIDRPGFALRRLTGDLYELTPQPGSVRLAPGERIEL
PFVAEYWLLRYSDVIPRPYVVVDGAPPAVLRYNDTDNELRYVESLPADAQNNSTGNAPPVAARPDPGRALPSVKRELPLP
GTLELRGVELALPDLPDAQVAALRERATTLGLDGAGVPVRGFVAPRRLPADIATPGGYRLAIGPRGVLIEGYDRAGLYYG
VQTLYSLAPAGGGPIPAMLVEDAPRFTHRGMHVDLARNFKQPATLRRLIDQMSAYKLNRLHLHLSDDEGWRIEIPGLPEL
TEIGSRRCHDPSETRCLLPQLGSGPDNRSGGGYLTRDDYVALVRYAAARFVQIIPEIDMPAHARAAVVTMEARYRRLHAA
GREQEANAYRLLDPQDTTNLTTVQFYDRRSDLNPCVPGALDFASKVIREIAAMHADAQAPLQTWHYGGDEAKNIFLGGGF
QALNGTDPNKGRIDLAAQDKPWARSPACTALLQRGEIKSIDELPTRFAKQVSAAVNANGIGTMAAWQDGIKHANGPQDFS
TRHVMVSLWDTIFWGASDSARDLSGKGYQTVLALPDYLYFDFPYTLNPRERGYYWGSHATDEYKVFSLAPENLPQNAEVM
GDRDGNPFEVTGTGPAPRIEGMQGQAWGEVMRNDTFLEYMTYPRLLALAERAWHRADWELPYAAGVRFKRGDTHHVDIAA
LQRDWAGFATLLTQRELPKLERAGVGYRKPTFTLTNP
>Mature_836_residues
PSFSQEFELKRTLPSLIAGLLIAVLSPAAIAAVPASGTANATAGSAQAAAAQAASLATQLSNGLALRVAVDNNHAAAAGV
PCADLGADGAACATGRLILQNRGHQAIADGGWKLYLHSIRRLLRIDRPGFALRRLTGDLYELTPQPGSVRLAPGERIELP
FVAEYWLLRYSDVIPRPYVVVDGAPPAVLRYNDTDNELRYVESLPADAQNNSTGNAPPVAARPDPGRALPSVKRELPLPG
TLELRGVELALPDLPDAQVAALRERATTLGLDGAGVPVRGFVAPRRLPADIATPGGYRLAIGPRGVLIEGYDRAGLYYGV
QTLYSLAPAGGGPIPAMLVEDAPRFTHRGMHVDLARNFKQPATLRRLIDQMSAYKLNRLHLHLSDDEGWRIEIPGLPELT
EIGSRRCHDPSETRCLLPQLGSGPDNRSGGGYLTRDDYVALVRYAAARFVQIIPEIDMPAHARAAVVTMEARYRRLHAAG
REQEANAYRLLDPQDTTNLTTVQFYDRRSDLNPCVPGALDFASKVIREIAAMHADAQAPLQTWHYGGDEAKNIFLGGGFQ
ALNGTDPNKGRIDLAAQDKPWARSPACTALLQRGEIKSIDELPTRFAKQVSAAVNANGIGTMAAWQDGIKHANGPQDFST
RHVMVSLWDTIFWGASDSARDLSGKGYQTVLALPDYLYFDFPYTLNPRERGYYWGSHATDEYKVFSLAPENLPQNAEVMG
DRDGNPFEVTGTGPAPRIEGMQGQAWGEVMRNDTFLEYMTYPRLLALAERAWHRADWELPYAAGVRFKRGDTHHVDIAAL
QRDWAGFATLLTQRELPKLERAGVGYRKPTFTLTNP

Specific function: Digests the beta-1,4-glycosidic bonds in N- acetylglucosamine (GlcNAc) oligomers (mainly dimers) [H]

COG id: COG3525

COG function: function code G; N-acetyl-beta-hexosaminidase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 20 family [H]

Homologues:

Organism=Drosophila melanogaster, GI17933586, Length=526, Percent_Identity=24.1444866920152, Blast_Score=79, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015882
- InterPro:   IPR008965
- InterPro:   IPR004866
- InterPro:   IPR012291
- InterPro:   IPR013812
- InterPro:   IPR001540
- InterPro:   IPR004867
- InterPro:   IPR015883
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03173 CHB_HEX; PF03174 CHB_HEX_C; PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 91221; Mature: 91090

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFSQEFELKRTLPSLIAGLLIAVLSPAAIAAVPASGTANATAGSAQAAAAQAASLATQ
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
LSNGLALRVAVDNNHAAAAGVPCADLGADGAACATGRLILQNRGHQAIADGGWKLYLHSI
HCCCEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHCEEEEECCCCEEECCCCHHHHHHHH
RRLLRIDRPGFALRRLTGDLYELTPQPGSVRLAPGERIELPFVAEYWLLRYSDVIPRPYV
HHHHHCCCCCHHHHHHCCHHEEECCCCCCEEECCCCEECCCHHHHHHHHHHHHCCCCCEE
VVDGAPPAVLRYNDTDNELRYVESLPADAQNNSTGNAPPVAARPDPGRALPSVKRELPLP
EECCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
GTLELRGVELALPDLPDAQVAALRERATTLGLDGAGVPVRGFVAPRRLPADIATPGGYRL
CCEEEEEEEEECCCCCCHHHHHHHHHHHEECCCCCCCCEEECCCCCCCCCCCCCCCCEEE
AIGPRGVLIEGYDRAGLYYGVQTLYSLAPAGGGPIPAMLVEDAPRFTHRGMHVDLARNFK
EECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHCCEEEEHHHCCC
QPATLRRLIDQMSAYKLNRLHLHLSDDEGWRIEIPGLPELTEIGSRRCHDPSETRCLLPQ
CHHHHHHHHHHHHHCEEEEEEEEEECCCCCEEECCCCCCHHHHHHCCCCCCCCCEEECCC
LGSGPDNRSGGGYLTRDDYVALVRYAAARFVQIIPEIDMPAHARAAVVTMEARYRRLHAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHC
GREQEANAYRLLDPQDTTNLTTVQFYDRRSDLNPCVPGALDFASKVIREIAAMHADAQAP
CCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
LQTWHYGGDEAKNIFLGGGFQALNGTDPNKGRIDLAAQDKPWARSPACTALLQRGEIKSI
HHHHCCCCCCCCEEEEECCEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCH
DELPTRFAKQVSAAVNANGIGTMAAWQDGIKHANGPQDFSTRHVMVSLWDTIFWGASDSA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHEEHHHHHCCCCCCC
RDLSGKGYQTVLALPDYLYFDFPYTLNPRERGYYWGSHATDEYKVFSLAPENLPQNAEVM
CCCCCCCCEEEEECCCEEEEECCEEECCCCCCEECCCCCCCCEEEEEECCCCCCCCCCEE
GDRDGNPFEVTGTGPAPRIEGMQGQAWGEVMRNDTFLEYMTYPRLLALAERAWHRADWEL
CCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PYAAGVRFKRGDTHHVDIAALQRDWAGFATLLTQRELPKLERAGVGYRKPTFTLTNP
CHHHCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEECCC
>Mature Secondary Structure 
PSFSQEFELKRTLPSLIAGLLIAVLSPAAIAAVPASGTANATAGSAQAAAAQAASLATQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
LSNGLALRVAVDNNHAAAAGVPCADLGADGAACATGRLILQNRGHQAIADGGWKLYLHSI
HCCCEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHCEEEEECCCCEEECCCCHHHHHHHH
RRLLRIDRPGFALRRLTGDLYELTPQPGSVRLAPGERIELPFVAEYWLLRYSDVIPRPYV
HHHHHCCCCCHHHHHHCCHHEEECCCCCCEEECCCCEECCCHHHHHHHHHHHHCCCCCEE
VVDGAPPAVLRYNDTDNELRYVESLPADAQNNSTGNAPPVAARPDPGRALPSVKRELPLP
EECCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
GTLELRGVELALPDLPDAQVAALRERATTLGLDGAGVPVRGFVAPRRLPADIATPGGYRL
CCEEEEEEEEECCCCCCHHHHHHHHHHHEECCCCCCCCEEECCCCCCCCCCCCCCCCEEE
AIGPRGVLIEGYDRAGLYYGVQTLYSLAPAGGGPIPAMLVEDAPRFTHRGMHVDLARNFK
EECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHCCEEEEHHHCCC
QPATLRRLIDQMSAYKLNRLHLHLSDDEGWRIEIPGLPELTEIGSRRCHDPSETRCLLPQ
CHHHHHHHHHHHHHCEEEEEEEEEECCCCCEEECCCCCCHHHHHHCCCCCCCCCEEECCC
LGSGPDNRSGGGYLTRDDYVALVRYAAARFVQIIPEIDMPAHARAAVVTMEARYRRLHAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHC
GREQEANAYRLLDPQDTTNLTTVQFYDRRSDLNPCVPGALDFASKVIREIAAMHADAQAP
CCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
LQTWHYGGDEAKNIFLGGGFQALNGTDPNKGRIDLAAQDKPWARSPACTALLQRGEIKSI
HHHHCCCCCCCCEEEEECCEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCH
DELPTRFAKQVSAAVNANGIGTMAAWQDGIKHANGPQDFSTRHVMVSLWDTIFWGASDSA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHEEHHHHHCCCCCCC
RDLSGKGYQTVLALPDYLYFDFPYTLNPRERGYYWGSHATDEYKVFSLAPENLPQNAEVM
CCCCCCCCEEEEECCCEEEEECCEEECCCCCCEECCCCCCCCEEEEEECCCCCCCCCCEE
GDRDGNPFEVTGTGPAPRIEGMQGQAWGEVMRNDTFLEYMTYPRLLALAERAWHRADWEL
CCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PYAAGVRFKRGDTHHVDIAALQRDWAGFATLLTQRELPKLERAGVGYRKPTFTLTNP
CHHHCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8621090; 8673609 [H]