Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116690833

Identifier: 116690833

GI number: 116690833

Start: 3109620

End: 3110003

Strand: Reverse

Name: 116690833

Synonym: Bcen2424_2813

Alternate gene names: NA

Gene position: 3110003-3109620 (Counterclockwise)

Preceding gene: 116690834

Following gene: 116690830

Centisome position: 89.27

GC content: 66.41

Gene sequence:

>384_bases
ATGGCGAAGGTGGTCGATGCGATCCGCGCGCTCGAGCGCGACCGGTTCCGGGCGATGGTGGACGGCGACGGGGAGGCGCT
CGCCGCGCTGCTGTCGGACAAGGTGTTTTTCGTCCACACCAACGGCAAGCGCGAAACCAAGCAGCAGTTCATCGACGCCA
TCGTCGCCGGCCGCCGCCGCTATCGCCAGATCGAAATCCAGTCGCAGGACGTGCTGCCGGTCGGCGACGAGACCTGCGTC
GTCACCGGCCGCGCATTGATCGAGATGGAAACGAACAACGGCGGCCTCGTTTTCCCGATTGCCTATACGTCCGTCCACAC
GCACGACCAGGGTCGCTGGTGCCTGTTCGCGTGGCAGGCGACGCGGTGCGCGACCGAGACGTGA

Upstream 100 bases:

>100_bases
AGAGCCGAATCCTGGTATAAATTTCCACCAGTTCTACCTGCAGTACAACTTCTGATCCGTACGCCCGTGCAAGGCGGGCG
CGTTGCCGAGGAGTCAGGCG

Downstream 100 bases:

>100_bases
GCGCGGGTGGCGCGCCTTTTCATGTCCCGACCGAAGCGGCCTTCTGAGCCGCTTTTTGCTGCCCCGTGCGGCGCGGATCG
CGCGGCGCACGGGCGGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MAKVVDAIRALERDRFRAMVDGDGEALAALLSDKVFFVHTNGKRETKQQFIDAIVAGRRRYRQIEIQSQDVLPVGDETCV
VTGRALIEMETNNGGLVFPIAYTSVHTHDQGRWCLFAWQATRCATET

Sequences:

>Translated_127_residues
MAKVVDAIRALERDRFRAMVDGDGEALAALLSDKVFFVHTNGKRETKQQFIDAIVAGRRRYRQIEIQSQDVLPVGDETCV
VTGRALIEMETNNGGLVFPIAYTSVHTHDQGRWCLFAWQATRCATET
>Mature_126_residues
AKVVDAIRALERDRFRAMVDGDGEALAALLSDKVFFVHTNGKRETKQQFIDAIVAGRRRYRQIEIQSQDVLPVGDETCVV
TGRALIEMETNNGGLVFPIAYTSVHTHDQGRWCLFAWQATRCATET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14271; Mature: 14140

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVVDAIRALERDRFRAMVDGDGEALAALLSDKVFFVHTNGKRETKQQFIDAIVAGRRR
CCHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCHH
YRQIEIQSQDVLPVGDETCVVTGRALIEMETNNGGLVFPIAYTSVHTHDQGRWCLFAWQA
EEEEEECCCCCCCCCCCEEEEECEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEC
TRCATET
CCCCCCC
>Mature Secondary Structure 
AKVVDAIRALERDRFRAMVDGDGEALAALLSDKVFFVHTNGKRETKQQFIDAIVAGRRR
CHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCHH
YRQIEIQSQDVLPVGDETCVVTGRALIEMETNNGGLVFPIAYTSVHTHDQGRWCLFAWQA
EEEEEECCCCCCCCCCCEEEEECEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEC
TRCATET
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA