| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is prs [H]
Identifier: 116690822
GI number: 116690822
Start: 3098909
End: 3099871
Strand: Direct
Name: prs [H]
Synonym: Bcen2424_2802
Alternate gene names: 116690822
Gene position: 3098909-3099871 (Clockwise)
Preceding gene: 116690821
Following gene: 116690823
Centisome position: 88.95
GC content: 63.14
Gene sequence:
>963_bases ATGAGCAGCCACAGCCATGATGGCCTGATGGTCTTTACTGGCAACGCGAATCCCGCGCTCGCCCAGGAAGTCGTCAATAT CCTTGGTATCCCCCTCGGCAAAGCAATGGTCAGCCGTTTCTCCGACGGCGAGATCCAGGTCGAGATCCAGGAAAACGTGC GCGGCAAGGACGTCTTCGTCCTGCAATCCACGTGCGCACCGGCGAACGACAACCTGATGGAACTGATGATCATGGTCGAT GCGCTCAAGCGCGCATCCGCTGGCCGGATCACCGCTGCCATCCCCTACTTCGGCTATGCGCGTCAGGATCGTCGCCCGCG TTCGGCGCGCGTCGCGATCTCGGCGAAGATCGTCGCGAACATGCTGGAAATCGCCGGCGTCGAGCGGATCATCACGATGG ATCTGCACGCCGACCAGATTCAGGGCTTCTTCGACATCCCGGTCGACAACATCTACGCGACGCCGATCCTGCTGGGCGAC CTGCGCAAGCAGAACTACTCGGATCTGCTCGTCGTGTCGCCGGACGTCGGCGGCGTGGTGCGTGCCCGGGCACTCGCGAA GCAGCTGAACTGCGATCTCGCGATCATCGACAAGCGTCGCCCGAAGGCGAACGTCGCCGAAGTGATGAACATCATCGGTG AAGTCGAAGGCCGCACCTGCGTGATCATGGACGACATGGTCGATACGGCAGGCACGCTCTGCAAGGCTGCACAAGTGCTG AAGGAGCGCGGCGCGAAGCAGGTTTTTGCCTACGCGACGCACCCGGTGCTGTCGGGCGGCGCCGCCGAGCGTATCGCCGC GTCGGAACTCGACGAGCTGGTCGTCACCGATACGATCCCGCTGTCGGCCGAATCGCTGGCGTGCTCGAAGATCCGCTCGC TGACGAGCGCGAGCCTGCTGGCCGAGACGTTCTCGCGGATTCGCCGCGGCGATTCGGTGATGTCGCTGTTCGCGGAATCC TGA
Upstream 100 bases:
>100_bases AAGGCACCGGATTTTGATTCCGGCATGCGAGGGTTCGAGTCCTTCCTCCCCTGCCAAAAATTTTCCCGCATTTCCCGCCC AAGCCTGAAGCAGGTGCACG
Downstream 100 bases:
>100_bases TCGCGAATCGACGGAACGAAGCATGCGCAGAAAGCGAAGCGGCAACGCTTCGCTTTTTGCACAATCGGACGGGATAGACG AAACCCCGGCCGTTTCATCG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSSHSHDGLMVFTGNANPALAQEVVNILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQSTCAPANDNLMELMIMVD ALKRASAGRITAAIPYFGYARQDRRPRSARVAISAKIVANMLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGD LRKQNYSDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVL KERGAKQVFAYATHPVLSGGAAERIAASELDELVVTDTIPLSAESLACSKIRSLTSASLLAETFSRIRRGDSVMSLFAES
Sequences:
>Translated_320_residues MSSHSHDGLMVFTGNANPALAQEVVNILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQSTCAPANDNLMELMIMVD ALKRASAGRITAAIPYFGYARQDRRPRSARVAISAKIVANMLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGD LRKQNYSDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVL KERGAKQVFAYATHPVLSGGAAERIAASELDELVVTDTIPLSAESLACSKIRSLTSASLLAETFSRIRRGDSVMSLFAES >Mature_319_residues SSHSHDGLMVFTGNANPALAQEVVNILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQSTCAPANDNLMELMIMVDA LKRASAGRITAAIPYFGYARQDRRPRSARVAISAKIVANMLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDL RKQNYSDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLK ERGAKQVFAYATHPVLSGGAAERIAASELDELVVTDTIPLSAESLACSKIRSLTSASLLAETFSRIRRGDSVMSLFAES
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=314, Percent_Identity=47.1337579617834, Blast_Score=299, Evalue=3e-81, Organism=Homo sapiens, GI4506127, Length=314, Percent_Identity=47.7707006369427, Blast_Score=298, Evalue=3e-81, Organism=Homo sapiens, GI28557709, Length=314, Percent_Identity=47.7707006369427, Blast_Score=298, Evalue=5e-81, Organism=Homo sapiens, GI84875539, Length=315, Percent_Identity=46.6666666666667, Blast_Score=297, Evalue=1e-80, Organism=Homo sapiens, GI4506133, Length=346, Percent_Identity=36.4161849710983, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI194018537, Length=345, Percent_Identity=37.3913043478261, Blast_Score=207, Evalue=9e-54, Organism=Homo sapiens, GI310128524, Length=149, Percent_Identity=36.241610738255, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI310115209, Length=149, Percent_Identity=36.241610738255, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI310118259, Length=149, Percent_Identity=36.241610738255, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI310119946, Length=149, Percent_Identity=36.241610738255, Blast_Score=99, Evalue=5e-21, Organism=Escherichia coli, GI1787458, Length=310, Percent_Identity=63.2258064516129, Blast_Score=412, Evalue=1e-116, Organism=Caenorhabditis elegans, GI17554702, Length=314, Percent_Identity=46.8152866242038, Blast_Score=298, Evalue=3e-81, Organism=Caenorhabditis elegans, GI25149168, Length=314, Percent_Identity=46.8152866242038, Blast_Score=298, Evalue=4e-81, Organism=Caenorhabditis elegans, GI17554704, Length=311, Percent_Identity=47.2668810289389, Blast_Score=297, Evalue=4e-81, Organism=Caenorhabditis elegans, GI71989924, Length=314, Percent_Identity=46.8152866242038, Blast_Score=297, Evalue=5e-81, Organism=Caenorhabditis elegans, GI17570245, Length=339, Percent_Identity=33.3333333333333, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6320946, Length=319, Percent_Identity=42.9467084639498, Blast_Score=265, Evalue=5e-72, Organism=Saccharomyces cerevisiae, GI6319403, Length=318, Percent_Identity=43.0817610062893, Blast_Score=263, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6321776, Length=300, Percent_Identity=46.3333333333333, Blast_Score=263, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6322667, Length=196, Percent_Identity=43.3673469387755, Blast_Score=160, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6324511, Length=108, Percent_Identity=39.8148148148148, Blast_Score=95, Evalue=2e-20, Organism=Drosophila melanogaster, GI21355239, Length=313, Percent_Identity=47.6038338658147, Blast_Score=291, Evalue=5e-79, Organism=Drosophila melanogaster, GI45551540, Length=335, Percent_Identity=44.4776119402985, Blast_Score=282, Evalue=3e-76, Organism=Drosophila melanogaster, GI24651458, Length=362, Percent_Identity=33.7016574585635, Blast_Score=208, Evalue=3e-54, Organism=Drosophila melanogaster, GI24651456, Length=362, Percent_Identity=33.7016574585635, Blast_Score=208, Evalue=3e-54, Organism=Drosophila melanogaster, GI281362873, Length=362, Percent_Identity=33.7016574585635, Blast_Score=207, Evalue=5e-54, Organism=Drosophila melanogaster, GI24651454, Length=362, Percent_Identity=33.7016574585635, Blast_Score=207, Evalue=5e-54, Organism=Drosophila melanogaster, GI24651462, Length=210, Percent_Identity=38.0952380952381, Blast_Score=144, Evalue=7e-35, Organism=Drosophila melanogaster, GI24651464, Length=210, Percent_Identity=38.0952380952381, Blast_Score=144, Evalue=7e-35, Organism=Drosophila melanogaster, GI45552010, Length=210, Percent_Identity=38.0952380952381, Blast_Score=144, Evalue=8e-35,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34517; Mature: 34386
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHSHDGLMVFTGNANPALAQEVVNILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFV CCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCCEEEE LQSTCAPANDNLMELMIMVDALKRASAGRITAAIPYFGYARQDRRPRSARVAISAKIVAN EECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHEEEEHHHHHHH MLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDLRKQNYSDLLVVSPDVGGVV HHHHCCCCEEEEEECCHHHHCCEEECCCCCEEECHHHHHHHHCCCCCCEEEECCCCCHHH RARALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVL HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHH KERGAKQVFAYATHPVLSGGAAERIAASELDELVVTDTIPLSAESLACSKIRSLTSASLL HHCCCHHEEHEECCCHHCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHH AETFSRIRRGDSVMSLFAES HHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure SSHSHDGLMVFTGNANPALAQEVVNILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFV CCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCCEEEE LQSTCAPANDNLMELMIMVDALKRASAGRITAAIPYFGYARQDRRPRSARVAISAKIVAN EECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHEEEEHHHHHHH MLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDLRKQNYSDLLVVSPDVGGVV HHHHCCCCEEEEEECCHHHHCCEEECCCCCEEECHHHHHHHHCCCCCCEEEECCCCCHHH RARALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVL HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHH KERGAKQVFAYATHPVLSGGAAERIAASELDELVVTDTIPLSAESLACSKIRSLTSASLL HHCCCHHEEHEECCCHHCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHH AETFSRIRRGDSVMSLFAES HHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]