Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690802

Identifier: 116690802

GI number: 116690802

Start: 3079479

End: 3080345

Strand: Reverse

Name: 116690802

Synonym: Bcen2424_2782

Alternate gene names: NA

Gene position: 3080345-3079479 (Counterclockwise)

Preceding gene: 116690803

Following gene: 116690801

Centisome position: 88.42

GC content: 71.05

Gene sequence:

>867_bases
ATGACGTTTCCGTGCATCGCGGCCGCGCGCCGCTTCGATCCGGCCGCGCACCTGCGTTTCGAGATCGCCGGCCAGGCGGT
CGGCTGGGTGCGCCGCCAGGACGTCGCGAAGCTCGTGCGCTGGCCCGACGTGTTCGAGCTGACCGGCGAGCGCGTCGTGC
TGTCGGCGCGCTACGATTCGGTCGATGCGCGCAGCATGGCGTTGGCCAGCGCGATCGGCGCGCTCGCGGCCGAGGGCGCG
ATTCCCGGCTGGCGCGACGAGATCTATGCGATCCGCAACCGCTTCGACGATCCGCCGCTCGCGTACATCGAGCGCGCCGC
GTCGCGCTTCTTCGGCACACAGACCTATGCGGTGCACGTGAACGGCATCGTAGAATATGCGGTTACGCCGGGCGAGCCGC
CCGTCGCGGCCGCGCCGAAGATGTGGCTCGGCCGCCGCAGCGCGACCAAGGCGACCGACCCCGGCATGCTCGACAACGTC
GTCGCGGGCGGGGTCGGCTGGGGGCTGGGCGTTCACGAGACGCTCGCGAAGGAATGCTGGGAAGAAGCCGGCATTCCGGC
CGACCTGGCGGCGCGCGCGATCGCGGGCCGCACGGTGCAGGTACTGAACTCGCTGCCGGAAGGCACGCAGTCCGAATTGA
TCTTCGTGTACGACCTGCCGCTGCCGCACGATTTCGCGCCGCGCAACCAGGATGGCGAAGTGGCCGAACACCTGCTGGCC
GGCGTGCCCGAGGTGATCGGCTGGCTGCGCGAAGGCCGCGCGACGATGGATGCGAGCCTCGCGACGCTCGACACGCTGCT
GCGCCACCGCTGGATCGCGGCGGCCGACGCGGCCGGCATCGACGCGCTGTTCGTGCCGGCTGCATGA

Upstream 100 bases:

>100_bases
GGCTGAAGCGGCGCCCGAAGGCCGGCGTGTGGCTCGACCGGATCGCGGGCGCCACGTTCATCGCGATCGGCATTCGCGTC
GCACTGAAGGATTGATGACG

Downstream 100 bases:

>100_bases
CGTGCACCGCGACGCGCGCCGCGCGGCGCGAACGGGCAATTTGACGAATACGGAAACAATGGGAGTAGCGGTCATGCCGA
CCGATTACAGCTTTATCTTG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: Thiamin Pyrophosphokinase; NUDIX Domain-Containing Protein; Nucleoside Diphosphate; Thiamine Pyrophosphokinase; Nucleoside Diphosphate Hydrolase Protein; NTP Pyrophosphohydrolase; MutT/Nudix Family Protein; NUDIX Domain Family Protein; Nudix Family Protein; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; Nudix Hydrolase; NUDIX Domain-Containing; Hydrolase NUDIX Family

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTFPCIAAARRFDPAAHLRFEIAGQAVGWVRRQDVAKLVRWPDVFELTGERVVLSARYDSVDARSMALASAIGALAAEGA
IPGWRDEIYAIRNRFDDPPLAYIERAASRFFGTQTYAVHVNGIVEYAVTPGEPPVAAAPKMWLGRRSATKATDPGMLDNV
VAGGVGWGLGVHETLAKECWEEAGIPADLAARAIAGRTVQVLNSLPEGTQSELIFVYDLPLPHDFAPRNQDGEVAEHLLA
GVPEVIGWLREGRATMDASLATLDTLLRHRWIAAADAAGIDALFVPAA

Sequences:

>Translated_288_residues
MTFPCIAAARRFDPAAHLRFEIAGQAVGWVRRQDVAKLVRWPDVFELTGERVVLSARYDSVDARSMALASAIGALAAEGA
IPGWRDEIYAIRNRFDDPPLAYIERAASRFFGTQTYAVHVNGIVEYAVTPGEPPVAAAPKMWLGRRSATKATDPGMLDNV
VAGGVGWGLGVHETLAKECWEEAGIPADLAARAIAGRTVQVLNSLPEGTQSELIFVYDLPLPHDFAPRNQDGEVAEHLLA
GVPEVIGWLREGRATMDASLATLDTLLRHRWIAAADAAGIDALFVPAA
>Mature_287_residues
TFPCIAAARRFDPAAHLRFEIAGQAVGWVRRQDVAKLVRWPDVFELTGERVVLSARYDSVDARSMALASAIGALAAEGAI
PGWRDEIYAIRNRFDDPPLAYIERAASRFFGTQTYAVHVNGIVEYAVTPGEPPVAAAPKMWLGRRSATKATDPGMLDNVV
AGGVGWGLGVHETLAKECWEEAGIPADLAARAIAGRTVQVLNSLPEGTQSELIFVYDLPLPHDFAPRNQDGEVAEHLLAG
VPEVIGWLREGRATMDASLATLDTLLRHRWIAAADAAGIDALFVPAA

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322602, Length=273, Percent_Identity=29.3040293040293, Blast_Score=122, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31046; Mature: 30914

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFPCIAAARRFDPAAHLRFEIAGQAVGWVRRQDVAKLVRWPDVFELTGERVVLSARYDS
CCCCHHHHHHHCCCHHHEEEEECCHHHHHHHHHHHHHHHCCCCHHEECCCEEEEEECCCC
VDARSMALASAIGALAAEGAIPGWRDEIYAIRNRFDDPPLAYIERAASRFFGTQTYAVHV
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEE
NGIVEYAVTPGEPPVAAAPKMWLGRRSATKATDPGMLDNVVAGGVGWGLGVHETLAKECW
CCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHH
EEAGIPADLAARAIAGRTVQVLNSLPEGTQSELIFVYDLPLPHDFAPRNQDGEVAEHLLA
HHCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
GVPEVIGWLREGRATMDASLATLDTLLRHRWIAAADAAGIDALFVPAA
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
>Mature Secondary Structure 
TFPCIAAARRFDPAAHLRFEIAGQAVGWVRRQDVAKLVRWPDVFELTGERVVLSARYDS
CCCHHHHHHHCCCHHHEEEEECCHHHHHHHHHHHHHHHCCCCHHEECCCEEEEEECCCC
VDARSMALASAIGALAAEGAIPGWRDEIYAIRNRFDDPPLAYIERAASRFFGTQTYAVHV
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEE
NGIVEYAVTPGEPPVAAAPKMWLGRRSATKATDPGMLDNVVAGGVGWGLGVHETLAKECW
CCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHH
EEAGIPADLAARAIAGRTVQVLNSLPEGTQSELIFVYDLPLPHDFAPRNQDGEVAEHLLA
HHCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
GVPEVIGWLREGRATMDASLATLDTLLRHRWIAAADAAGIDALFVPAA
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA