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The map label for this gene is yajR [H]

Identifier: 116690798

GI number: 116690798

Start: 3072768

End: 3073955

Strand: Reverse

Name: yajR [H]

Synonym: Bcen2424_2778

Alternate gene names: 116690798

Gene position: 3073955-3072768 (Counterclockwise)

Preceding gene: 116690801

Following gene: 116690797

Centisome position: 88.23

GC content: 65.91

Gene sequence:

>1188_bases
ATGTCCAATCCGTCTGCCACGTCTTCCCGCATGACTGCGCCCGAACTGCGCGCGACCACGTCGCTCGCGGCGATCTTCGC
GTTGCGCATGCTCGGCCTGTTCATGATCATGCCGGTGTTCTCGGTCTATGCGAAAACCATCCCGGGCGGCGACAACGTGC
TGCTCGTCGGGATCGCGCTCGGGGCCTACGGCGTCACGCAGTCGCTGTTCTATATCTTCTACGGCTGGGCGTCCGACAAG
TTCGGCCGCAAGCCGGTGATCGCCACGGGCCTCGTGATCTTCGCGCTCGGCAGCTTCGTCGCCGCGTTCGCGCACGACAT
CACGTGGATCATCGTCGGCCGCGTGATCCAGGGGATGGGCGCCGTGTCGTCGGCGGTGCTCGCGTTCATCGCCGACCTGA
CCTCCGAGCAGAACCGCACGAAGGCGATGGCGATGGTCGGCGGCTCGATCGGCGTGTCGTTCGCGGTCGCGATCGTCGGT
GCGCCGATCGTGTTCCACTGGGTCGGGATGAGCGGGCTGTTCACGATCGTCGGCGTGCTGTCGATCCTCGCGATCGGCGT
CGTGCTGTGGATCGTGCCCGACGCGGCGAAGCCCGTCCACGTGCGCGCGCCGTTCGCCGAGGTGCTGCACAACGTCGAGC
TGCTGCGCCTGAACTTCGGCGTGCTGGTGCTGCATGCGACGCAGACGGCGCTGTTCCTGGTCGTGCCGCGCCTCTTGGTC
GACGGCGGGCTGCCGGTCGCTGCACACTGGAAGGTCTACCTGCCGGTGATGGGGCTCGCGTTCGTGATGATGGTGCCGGC
GATCATCGTCGCGGAAAAACGGGGCAAGATGAAGCCGGTGCTGCTCGGCGGCATTCTGGCTATCCTGATCGGCCAATTGT
TGCTCGGCAGCGCACCGCATACCATTCTGATTGTGGCGGCGATCCTCTTCGTCTACTTCCTCGGCTTCAACATCCTGGAA
GCGTCGCAGCCGTCGCTCGTGTCGAAGCTCGCGCCGGGTTCGCGCAAGGGCGCGGCCACGGGTGTCTACAACACCACGCA
GTCGATCGGGCTCGCGCTCGGCGGCATCGTGGGCGGCTGGCTGCTGAAGCACGGCGGCGCGAACACGGTCTTTTATACCT
GTTCGGGGCTCGTTGCCGCGTGGCTTATAATCGCGGCCAATATGAAGGCGCCGCCGCGCAAGGCCTGA

Upstream 100 bases:

>100_bases
CGGCCCCGACGTGTCGTCCGAAAGGCCGCCAGGCCGCCGGTCCTGATCTTCCGCCGCCCGCTGCCGGGCGGACATTCCGA
TCATTCGAAATTCATTCCCG

Downstream 100 bases:

>100_bases
ACCTGATTGTCGGGCAGGCGCCGGCGGCGTTCGCCGGCTCGCCCGGCGGGCCGCTCCGACGCTTGCGCGGGCGGCCCCGC
ATTGAATTTACTGGAGAAAC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MSNPSATSSRMTAPELRATTSLAAIFALRMLGLFMIMPVFSVYAKTIPGGDNVLLVGIALGAYGVTQSLFYIFYGWASDK
FGRKPVIATGLVIFALGSFVAAFAHDITWIIVGRVIQGMGAVSSAVLAFIADLTSEQNRTKAMAMVGGSIGVSFAVAIVG
APIVFHWVGMSGLFTIVGVLSILAIGVVLWIVPDAAKPVHVRAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRLLV
DGGLPVAAHWKVYLPVMGLAFVMMVPAIIVAEKRGKMKPVLLGGILAILIGQLLLGSAPHTILIVAAILFVYFLGFNILE
ASQPSLVSKLAPGSRKGAATGVYNTTQSIGLALGGIVGGWLLKHGGANTVFYTCSGLVAAWLIIAANMKAPPRKA

Sequences:

>Translated_395_residues
MSNPSATSSRMTAPELRATTSLAAIFALRMLGLFMIMPVFSVYAKTIPGGDNVLLVGIALGAYGVTQSLFYIFYGWASDK
FGRKPVIATGLVIFALGSFVAAFAHDITWIIVGRVIQGMGAVSSAVLAFIADLTSEQNRTKAMAMVGGSIGVSFAVAIVG
APIVFHWVGMSGLFTIVGVLSILAIGVVLWIVPDAAKPVHVRAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRLLV
DGGLPVAAHWKVYLPVMGLAFVMMVPAIIVAEKRGKMKPVLLGGILAILIGQLLLGSAPHTILIVAAILFVYFLGFNILE
ASQPSLVSKLAPGSRKGAATGVYNTTQSIGLALGGIVGGWLLKHGGANTVFYTCSGLVAAWLIIAANMKAPPRKA
>Mature_394_residues
SNPSATSSRMTAPELRATTSLAAIFALRMLGLFMIMPVFSVYAKTIPGGDNVLLVGIALGAYGVTQSLFYIFYGWASDKF
GRKPVIATGLVIFALGSFVAAFAHDITWIIVGRVIQGMGAVSSAVLAFIADLTSEQNRTKAMAMVGGSIGVSFAVAIVGA
PIVFHWVGMSGLFTIVGVLSILAIGVVLWIVPDAAKPVHVRAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRLLVD
GGLPVAAHWKVYLPVMGLAFVMMVPAIIVAEKRGKMKPVLLGGILAILIGQLLLGSAPHTILIVAAILFVYFLGFNILEA
SQPSLVSKLAPGSRKGAATGVYNTTQSIGLALGGIVGGWLLKHGGANTVFYTCSGLVAAWLIIAANMKAPPRKA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=389, Percent_Identity=42.9305912596401, Blast_Score=314, Evalue=8e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41400; Mature: 41269

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPSATSSRMTAPELRATTSLAAIFALRMLGLFMIMPVFSVYAKTIPGGDNVLLVGIAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHH
GAYGVTQSLFYIFYGWASDKFGRKPVIATGLVIFALGSFVAAFAHDITWIIVGRVIQGMG
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVSSAVLAFIADLTSEQNRTKAMAMVGGSIGVSFAVAIVGAPIVFHWVGMSGLFTIVGVL
HHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
SILAIGVVLWIVPDAAKPVHVRAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRLLV
HHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCEEEEEECCEEEEEHHHHHHHHHHHHHHH
DGGLPVAAHWKVYLPVMGLAFVMMVPAIIVAEKRGKMKPVLLGGILAILIGQLLLGSAPH
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH
TILIVAAILFVYFLGFNILEASQPSLVSKLAPGSRKGAATGVYNTTQSIGLALGGIVGGW
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LLKHGGANTVFYTCSGLVAAWLIIAANMKAPPRKA
HHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SNPSATSSRMTAPELRATTSLAAIFALRMLGLFMIMPVFSVYAKTIPGGDNVLLVGIAL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHH
GAYGVTQSLFYIFYGWASDKFGRKPVIATGLVIFALGSFVAAFAHDITWIIVGRVIQGMG
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVSSAVLAFIADLTSEQNRTKAMAMVGGSIGVSFAVAIVGAPIVFHWVGMSGLFTIVGVL
HHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
SILAIGVVLWIVPDAAKPVHVRAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRLLV
HHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCEEEEEECCEEEEEHHHHHHHHHHHHHHH
DGGLPVAAHWKVYLPVMGLAFVMMVPAIIVAEKRGKMKPVLLGGILAILIGQLLLGSAPH
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH
TILIVAAILFVYFLGFNILEASQPSLVSKLAPGSRKGAATGVYNTTQSIGLALGGIVGGW
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LLKHGGANTVFYTCSGLVAAWLIIAANMKAPPRKA
HHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]