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The map label for this gene is pcl [H]

Identifier: 116690781

GI number: 116690781

Start: 3056301

End: 3058073

Strand: Direct

Name: pcl [H]

Synonym: Bcen2424_2761

Alternate gene names: 116690781

Gene position: 3056301-3058073 (Clockwise)

Preceding gene: 116690780

Following gene: 116690782

Centisome position: 87.73

GC content: 73.04

Gene sequence:

>1773_bases
ATGCCGACTCACCCGCTGGTATTCCATGCCTCGCCCGACCAGACGATCGCCTGGCGCGACGGCTCGCCCGTCACCGTGCG
CGCGTTCGTCGCCGACGTCGCGCGCGTGACCGCCGCGCTACCCGCCGGCAGCCACGTGTTCAACGTGTGCCGCGACCGCT
ATCGCTTCGCGGTCAGCCTGTGCGCGGCGCTCGTCGCCGGCAAGGTCAGCCTGCTGCCGTCGACGCACACGCCGGAAATG
GTGCGCCAGCTCGCGTCGTTCGCGCCCGATGCGTTCTGCCTGCACGATGCGCCCGACTGCGCGATCGACCTGCCGCGCTT
CGCGTACCCCGATGCCGCGCCGGGCGAGGCGCCGAGCGATACGCCGTTCGCCGTCCCGCGGATCGACGCGGCGCGGATCA
TGGCCTACGTGTTCACGTCCGGCTCGACCGGCGCGCCGGTGCCGCACCGCAAGACCTGGGGCTTCCTGGTCGGCTGCGTG
CGCGCGGCGGCCGACCGCCTCGGGCTGCTCGACGGCCGCGCGGCCACGCTGATCGGCACGGTGCCCGCGCAGCACATGTA
CGGCTTCGAGTCGACGGTGCTGCTCGCGCTGATCGGCGGCCTCGCGTTCAGCAACCGCCAGCCGTTCTACCCGAGCGACA
TCCGCGACGAGCTCGACGCGATCCCGCAGCCGCGCGTGCTCGTCACGTCGCCGATCCACTTGCGTGCGCTGCTGTCGGCC
GGCCATGCGCTGCCGCCTGCGGCGCTCGTGCTGTCGGCCACCGCGCCGCTGTCGGAGAAGCTCGCGTGCGAAGCCGAGGC
CGCGCTCGACGCGCCGCTCGTCGAGATCTACGGCAGCACCGAGACCGGCCAGATCGCGACCCGTCGGACGTCGCAAGGCG
CGGCGTGGGAACTGTTCCCGGACATCCGGCTCGACGCGCGCGCAGAACCGGATGGCGACGACAGCGGGCCGACGGTCTGG
GTATCGGGCGGCCACGTCGAGACGCCGGTGCCGATGGGCGATGCGCTCGAACTGCTCGGCGACGGCCGGTTCCTGCTGCA
CGGCCGCAAGGCCGACCTCGTCAACATCGCCGGCAAGCGCACGTCGCTCGCTTATCTGAACCATCAGCTCAACGCGATTG
CCGAAGTGGTCGACGGCGTGTTCTTCATGCCCGACGAAGCCGCGCCGACGCACGGCGACACCGCCCTCGAGCCGGTCACG
CGGCTCGTCGCGCTGGTCGTCGCGCCGACGCTCTCGGCCGCCGATCTGCAGCGCGCGCTGCGCGAGCGGATCGATCCCGC
GTTCATGCCGCGCCCGCTCGTGTTCGTCGATGCGCTGCCGCGCAACGAAACGGGCAAGCTGCCGCGCGACGTGCTGGCCG
CACTCGTTGCGCAACATACGCGTAGCGCGGCGGCGACGGCCACGACGGCCATGCCGCCCGCGACGCCGAACGAGCGCGAC
CCGGCCGGCACGCCCGCGCTCGCGTTCACGATTGCCGCCGACCATCCCGCGCTGCCCGGCCACTTCCCGGGCCATCCGGT
CGTGCCCGGCGTCGTGCTGCTCGATCACGCGATCCACACGATCGGCGCGGCGCTGAACCGTCCGCTGCATGCGTGGCGGC
TCGGGTCCGCGAAATTCCTGAGCCCGGTCGCGCCCGGCGAACCGCTCGATCTCGCGTACGACGCGGCAGCCAGCGGCGCG
ATCCGCTTCACGGTGCGCGCCGGGTCGCGCGAGGTCGCGACCGGCGTGCTGTCCGCCCCACCGCCCGCCGCGCAGGATGG
CGCGCAGCCATGA

Upstream 100 bases:

>100_bases
GTATCGCGCGACGACCCACGCCTCGCAGGCCGCGCGATGAATTCATGACCGGCGCGGCCCCAAGGGCCGCGCGGGCCTTC
GTTCCCGTCTTGACCGATTT

Downstream 100 bases:

>100_bases
AGCGCACCGCATGGGCCGAACGCCAGGAACGCAGCAACGCGAGTTTGCTGCGCGTCATGACGTGGATCTCGCTGCGCTTC
GGCCGGCAGCGCGCGCGCAT

Product: acyl-coenzyme A synthetases/AMP-(fatty) acid ligases-like protein

Products: NA

Alternate protein names: 4CL; 4-coumaroyl-CoA synthase [H]

Number of amino acids: Translated: 590; Mature: 589

Protein sequence:

>590_residues
MPTHPLVFHASPDQTIAWRDGSPVTVRAFVADVARVTAALPAGSHVFNVCRDRYRFAVSLCAALVAGKVSLLPSTHTPEM
VRQLASFAPDAFCLHDAPDCAIDLPRFAYPDAAPGEAPSDTPFAVPRIDAARIMAYVFTSGSTGAPVPHRKTWGFLVGCV
RAAADRLGLLDGRAATLIGTVPAQHMYGFESTVLLALIGGLAFSNRQPFYPSDIRDELDAIPQPRVLVTSPIHLRALLSA
GHALPPAALVLSATAPLSEKLACEAEAALDAPLVEIYGSTETGQIATRRTSQGAAWELFPDIRLDARAEPDGDDSGPTVW
VSGGHVETPVPMGDALELLGDGRFLLHGRKADLVNIAGKRTSLAYLNHQLNAIAEVVDGVFFMPDEAAPTHGDTALEPVT
RLVALVVAPTLSAADLQRALRERIDPAFMPRPLVFVDALPRNETGKLPRDVLAALVAQHTRSAAATATTAMPPATPNERD
PAGTPALAFTIAADHPALPGHFPGHPVVPGVVLLDHAIHTIGAALNRPLHAWRLGSAKFLSPVAPGEPLDLAYDAAASGA
IRFTVRAGSREVATGVLSAPPPAAQDGAQP

Sequences:

>Translated_590_residues
MPTHPLVFHASPDQTIAWRDGSPVTVRAFVADVARVTAALPAGSHVFNVCRDRYRFAVSLCAALVAGKVSLLPSTHTPEM
VRQLASFAPDAFCLHDAPDCAIDLPRFAYPDAAPGEAPSDTPFAVPRIDAARIMAYVFTSGSTGAPVPHRKTWGFLVGCV
RAAADRLGLLDGRAATLIGTVPAQHMYGFESTVLLALIGGLAFSNRQPFYPSDIRDELDAIPQPRVLVTSPIHLRALLSA
GHALPPAALVLSATAPLSEKLACEAEAALDAPLVEIYGSTETGQIATRRTSQGAAWELFPDIRLDARAEPDGDDSGPTVW
VSGGHVETPVPMGDALELLGDGRFLLHGRKADLVNIAGKRTSLAYLNHQLNAIAEVVDGVFFMPDEAAPTHGDTALEPVT
RLVALVVAPTLSAADLQRALRERIDPAFMPRPLVFVDALPRNETGKLPRDVLAALVAQHTRSAAATATTAMPPATPNERD
PAGTPALAFTIAADHPALPGHFPGHPVVPGVVLLDHAIHTIGAALNRPLHAWRLGSAKFLSPVAPGEPLDLAYDAAASGA
IRFTVRAGSREVATGVLSAPPPAAQDGAQP
>Mature_589_residues
PTHPLVFHASPDQTIAWRDGSPVTVRAFVADVARVTAALPAGSHVFNVCRDRYRFAVSLCAALVAGKVSLLPSTHTPEMV
RQLASFAPDAFCLHDAPDCAIDLPRFAYPDAAPGEAPSDTPFAVPRIDAARIMAYVFTSGSTGAPVPHRKTWGFLVGCVR
AAADRLGLLDGRAATLIGTVPAQHMYGFESTVLLALIGGLAFSNRQPFYPSDIRDELDAIPQPRVLVTSPIHLRALLSAG
HALPPAALVLSATAPLSEKLACEAEAALDAPLVEIYGSTETGQIATRRTSQGAAWELFPDIRLDARAEPDGDDSGPTVWV
SGGHVETPVPMGDALELLGDGRFLLHGRKADLVNIAGKRTSLAYLNHQLNAIAEVVDGVFFMPDEAAPTHGDTALEPVTR
LVALVVAPTLSAADLQRALRERIDPAFMPRPLVFVDALPRNETGKLPRDVLAALVAQHTRSAAATATTAMPPATPNERDP
AGTPALAFTIAADHPALPGHFPGHPVVPGVVLLDHAIHTIGAALNRPLHAWRLGSAKFLSPVAPGEPLDLAYDAAASGAI
RFTVRAGSREVATGVLSAPPPAAQDGAQP

Specific function: Converts p-coumaric acid into p-coumaryl CoA. This is necessary for the activation of the photoactive yellow protein (PYP) chromophore [H]

COG id: COG0365

COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012743
- InterPro:   IPR020845
- InterPro:   IPR000873 [H]

Pfam domain/function: PF00501 AMP-binding [H]

EC number: =6.2.1.12 [H]

Molecular weight: Translated: 61956; Mature: 61825

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTHPLVFHASPDQTIAWRDGSPVTVRAFVADVARVTAALPAGSHVFNVCRDRYRFAVSL
CCCCCEEEECCCCCEEEECCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
CAALVAGKVSLLPSTHTPEMVRQLASFAPDAFCLHDAPDCAIDLPRFAYPDAAPGEAPSD
HHHHHHCCCEECCCCCCHHHHHHHHHHCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCC
TPFAVPRIDAARIMAYVFTSGSTGAPVPHRKTWGFLVGCVRAAADRLGLLDGRAATLIGT
CCCCCCCCHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
VPAQHMYGFESTVLLALIGGLAFSNRQPFYPSDIRDELDAIPQPRVLVTSPIHLRALLSA
CCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEECCHHHHHHHHC
GHALPPAALVLSATAPLSEKLACEAEAALDAPLVEIYGSTETGQIATRRTSQGAAWELFP
CCCCCCHHEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCEEEECC
DIRLDARAEPDGDDSGPTVWVSGGHVETPVPMGDALELLGDGRFLLHGRKADLVNIAGKR
CCEECCCCCCCCCCCCCEEEEECCEECCCCCCCHHHHHHCCCEEEEECCCCCEEEECCCC
TSLAYLNHQLNAIAEVVDGVFFMPDEAAPTHGDTALEPVTRLVALVVAPTLSAADLQRAL
HHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
RERIDPAFMPRPLVFVDALPRNETGKLPRDVLAALVAQHTRSAAATATTAMPPATPNERD
HHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PAGTPALAFTIAADHPALPGHFPGHPVVPGVVLLDHAIHTIGAALNRPLHAWRLGSAKFL
CCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEECCCHHHC
SPVAPGEPLDLAYDAAASGAIRFTVRAGSREVATGVLSAPPPAAQDGAQP
CCCCCCCCCCEEHHCCCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTHPLVFHASPDQTIAWRDGSPVTVRAFVADVARVTAALPAGSHVFNVCRDRYRFAVSL
CCCCEEEECCCCCEEEECCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
CAALVAGKVSLLPSTHTPEMVRQLASFAPDAFCLHDAPDCAIDLPRFAYPDAAPGEAPSD
HHHHHHCCCEECCCCCCHHHHHHHHHHCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCC
TPFAVPRIDAARIMAYVFTSGSTGAPVPHRKTWGFLVGCVRAAADRLGLLDGRAATLIGT
CCCCCCCCHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
VPAQHMYGFESTVLLALIGGLAFSNRQPFYPSDIRDELDAIPQPRVLVTSPIHLRALLSA
CCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEECCHHHHHHHHC
GHALPPAALVLSATAPLSEKLACEAEAALDAPLVEIYGSTETGQIATRRTSQGAAWELFP
CCCCCCHHEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCEEEECC
DIRLDARAEPDGDDSGPTVWVSGGHVETPVPMGDALELLGDGRFLLHGRKADLVNIAGKR
CCEECCCCCCCCCCCCCEEEEECCEECCCCCCCHHHHHHCCCEEEEECCCCCEEEECCCC
TSLAYLNHQLNAIAEVVDGVFFMPDEAAPTHGDTALEPVTRLVALVVAPTLSAADLQRAL
HHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
RERIDPAFMPRPLVFVDALPRNETGKLPRDVLAALVAQHTRSAAATATTAMPPATPNERD
HHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PAGTPALAFTIAADHPALPGHFPGHPVVPGVVLLDHAIHTIGAALNRPLHAWRLGSAKFL
CCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEECCCHHHC
SPVAPGEPLDLAYDAAASGAIRFTVRAGSREVATGVLSAPPPAAQDGAQP
CCCCCCCCCCEEHHCCCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA