Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690777

Identifier: 116690777

GI number: 116690777

Start: 3052629

End: 3053621

Strand: Reverse

Name: 116690777

Synonym: Bcen2424_2757

Alternate gene names: NA

Gene position: 3053621-3052629 (Counterclockwise)

Preceding gene: 116690778

Following gene: 116690776

Centisome position: 87.65

GC content: 71.9

Gene sequence:

>993_bases
ATGCTGACCGATGCCGCGCCCGGCCTGCCGGTCGCGCCGGTGCAGATGGCGCTGCTCGGCGCCGAAGTCGCACCGGGCGA
GGCCGTCTGCGAACTGTGGCAGTGCGATGCGCACGACCTGCGCGGCGAACGGCGCGGTCCACTGCATTACCGCTACAGTG
AAGCGGCGGGGCTCGTGTTCGGCAGCCTCGTCGTGCACGAGACGGACGCGGCTTACGACGCGTCGCGCGACGGCGGCACG
CCGCTCGAACGCGCGACGTTCGATGCGTACCGCGCGCTGTTCGACCTGCTCGATACGCTCGGCATGCCGCATCCGCTGCG
GATCTGGAACACCGTGCCGGCGATCAATGCGGTGCAGTTCGGCGTCGAGCGCTATCGTCAATTCAATATCGGCCGTCAGC
GCGCATTCGACGCGTGCCGCCGCGCATTGACGGGCGGCGTGCCGGCCGCGTGCGCACTCGGCTCGGTCGAGGCGGTCGCG
GGCGATGCGTCGCCGGCCGCGCCGCTCGCGATTCATTTCCTCGCGAGCCGCACGCCGGCCGACTCGATCGAGAATCCGCG
CCAGGTCAGCGCGTATCACTATCCGGCGCAGTACGGCCCGCGTGCGCCGACGTTCGCGCGCGCCGCCGCGTGGGCCGACG
GTGAAGCGAAGCCGGTGCTGTTCGTCTCGGGCACCGCGAGCATCGTCGGGCACCGCACCGTGCATCGCGGCGACGTCGTC
GCGCAGACGCGCGAGACGGTCGCGAACCTCGCGGCCGTGCTCGAGCAGGCCGCGCGGCAGGGGCACGGGCCGTTCTCGCT
CGCGGACCTCGGCTACCGCGTCTACGTGCGCGACGCAGGCGACACCGCGGCGCTGGCCGCGATCGGCCGCGTGCTGCGCG
AGGCCGCCGGTCCTCACGTGCGGCCGCTGTTCGTTCATGCGGACGTGTGTCGCGACGACCTGCTGGTCGAGATCGAGGCC
AGCGCCGGTCATGCGATGGAGTGGCTGTCATGA

Upstream 100 bases:

>100_bases
AGGCGACGGACTCGATCGCGTGTTTCCCGGCGCGCTGGGTGCGGTGTGCATCGGCGCGGCGGGAACCCCGGACGCGTCGC
GCGCGGCGGCCATGGCGCGG

Downstream 100 bases:

>100_bases
AGCGCGAGAGCCTCACGATCCGGCAACCGGTCCGGCCCGCGGCCGGTGTCGACGAAGCGTGCCGGCGTTCGTCGGCGAGT
CATACACTTTTGTCAGGATC

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Pteridine-Dependent Dioxygenase; Pteridine-Dependent Deoxygenase Like Protein; FkbO Protein; Pteridine-Dependent Deoxygenase; Dioxygenase

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MLTDAAPGLPVAPVQMALLGAEVAPGEAVCELWQCDAHDLRGERRGPLHYRYSEAAGLVFGSLVVHETDAAYDASRDGGT
PLERATFDAYRALFDLLDTLGMPHPLRIWNTVPAINAVQFGVERYRQFNIGRQRAFDACRRALTGGVPAACALGSVEAVA
GDASPAAPLAIHFLASRTPADSIENPRQVSAYHYPAQYGPRAPTFARAAAWADGEAKPVLFVSGTASIVGHRTVHRGDVV
AQTRETVANLAAVLEQAARQGHGPFSLADLGYRVYVRDAGDTAALAAIGRVLREAAGPHVRPLFVHADVCRDDLLVEIEA
SAGHAMEWLS

Sequences:

>Translated_330_residues
MLTDAAPGLPVAPVQMALLGAEVAPGEAVCELWQCDAHDLRGERRGPLHYRYSEAAGLVFGSLVVHETDAAYDASRDGGT
PLERATFDAYRALFDLLDTLGMPHPLRIWNTVPAINAVQFGVERYRQFNIGRQRAFDACRRALTGGVPAACALGSVEAVA
GDASPAAPLAIHFLASRTPADSIENPRQVSAYHYPAQYGPRAPTFARAAAWADGEAKPVLFVSGTASIVGHRTVHRGDVV
AQTRETVANLAAVLEQAARQGHGPFSLADLGYRVYVRDAGDTAALAAIGRVLREAAGPHVRPLFVHADVCRDDLLVEIEA
SAGHAMEWLS
>Mature_330_residues
MLTDAAPGLPVAPVQMALLGAEVAPGEAVCELWQCDAHDLRGERRGPLHYRYSEAAGLVFGSLVVHETDAAYDASRDGGT
PLERATFDAYRALFDLLDTLGMPHPLRIWNTVPAINAVQFGVERYRQFNIGRQRAFDACRRALTGGVPAACALGSVEAVA
GDASPAAPLAIHFLASRTPADSIENPRQVSAYHYPAQYGPRAPTFARAAAWADGEAKPVLFVSGTASIVGHRTVHRGDVV
AQTRETVANLAAVLEQAARQGHGPFSLADLGYRVYVRDAGDTAALAAIGRVLREAAGPHVRPLFVHADVCRDDLLVEIEA
SAGHAMEWLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35174; Mature: 35174

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTDAAPGLPVAPVQMALLGAEVAPGEAVCELWQCDAHDLRGERRGPLHYRYSEAAGLVF
CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCCCCCCCCEEEHHHHHHHHH
GSLVVHETDAAYDASRDGGTPLERATFDAYRALFDLLDTLGMPHPLRIWNTVPAINAVQF
HHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHH
GVERYRQFNIGRQRAFDACRRALTGGVPAACALGSVEAVAGDASPAAPLAIHFLASRTPA
HHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHCCCCCCCCHHHHHHHHCCCCH
DSIENPRQVSAYHYPAQYGPRAPTFARAAAWADGEAKPVLFVSGTASIVGHRTVHRGDVV
HHCCCCCCEEEEECCHHCCCCCCCHHHHHHCCCCCCCEEEEEECCHHHHHCCCCCCCHHH
AQTRETVANLAAVLEQAARQGHGPFSLADLGYRVYVRDAGDTAALAAIGRVLREAAGPHV
HHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCCC
RPLFVHADVCRDDLLVEIEASAGHAMEWLS
EEEEEEHHHCCCCEEEEEECCCCCHHHHCC
>Mature Secondary Structure
MLTDAAPGLPVAPVQMALLGAEVAPGEAVCELWQCDAHDLRGERRGPLHYRYSEAAGLVF
CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCCCCCCCCEEEHHHHHHHHH
GSLVVHETDAAYDASRDGGTPLERATFDAYRALFDLLDTLGMPHPLRIWNTVPAINAVQF
HHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHH
GVERYRQFNIGRQRAFDACRRALTGGVPAACALGSVEAVAGDASPAAPLAIHFLASRTPA
HHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHCCCCCCCCHHHHHHHHCCCCH
DSIENPRQVSAYHYPAQYGPRAPTFARAAAWADGEAKPVLFVSGTASIVGHRTVHRGDVV
HHCCCCCCEEEEECCHHCCCCCCCHHHHHHCCCCCCCEEEEEECCHHHHHCCCCCCCHHH
AQTRETVANLAAVLEQAARQGHGPFSLADLGYRVYVRDAGDTAALAAIGRVLREAAGPHV
HHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCCC
RPLFVHADVCRDDLLVEIEASAGHAMEWLS
EEEEEEHHHCCCCEEEEEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA